Evidence map›Paper›PMID 33407969›Full record

ArticleJournal of developmental origins of health and disease2021

Associations between stool micro-transcriptome, gut microbiota, and infant growth.

Molly C Carney, Xiang Zhan, Akanksha Rangnekar, Maria Z Chroneos, Sarah J C Craig, Kateryna D Makova, Ian M Paul, Steven D Hicks

Open access · hybridAbstract read
In one paragraph

Article in Journal of developmental origins of health and disease, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed, 2 pooled it
0.4field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 2 syntheses or guidelines pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Methylation profiles at birth linked to early childhood obesity.Journal of developmental origins of health and disease · 2024
    Article
  5. Methylation profiles at birth linked to early childhood obesity.medRxiv : the preprint server for health sciences · 2024
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Molly C CarneyDepartment of Pediatrics, Penn State College of Medicine, Hershey, PA, USA.ORCID 0000-0001-9501-8526
Xiang ZhanDepartment of Public Health Sciences, Penn State College of Medicine, Hershey, PA, USA.
Akanksha RangnekarQuadrant Biosciences, Syracuse, NY, USA.
Maria Z ChroneosDepartment of Pediatrics, Penn State College of Medicine, Hershey, PA, USA.
Sarah J C CraigDepartment of Biology, Eberly College of Science, Penn State University, University Park, PA, USA.
Kateryna D MakovaDepartment of Biology, Eberly College of Science, Penn State University, University Park, PA, USA.
Ian M PaulDepartment of Pediatrics, Penn State College of Medicine, Hershey, PA, USA.
Steven D HicksDepartment of Pediatrics, Penn State College of Medicine, Hershey, PA, USA.ORCID 0000-0002-9579-6798
Pennsylvania State University · USPenn State Milton S. Hershey Medical Center · US

Funding

Penn State Clinical and Translational Science InstituteUL1TR002014 · NCATS · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI KRASCHNEWSKI, JENNIFER L. · 2016 to 2025
$33.7M
Penn State Clinical and Translational Science InstituteUL1TR000127 · NCATS · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI SINOWAY, LAWRENCE I · 2012 to 2015
$17.1M
Penn State Institutional Career Development CoreKL2TR002015 · NCATS · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI VAN SCOY, LAUREN JODI · 2016 to 2025
$7.8M
NRSA Training CoreTL1TR002016 · NCATS · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI THOMAS, GAIL D. · 2016 to 2025
$3.4M
Effect of Birth Order and Genetics on Infant Parenting and Obesity RiskR01DK099364 · NIDDK · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI PAUL, IAN M · 2013 to 2017
$3.1M
Novel statistical methods for controlled variable selection of microbiome dataR21AI144765 · NIAID · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI CHINCHILLI, VERNON M · 2020 to 2021
$412k
NCATS NIH HHS KL2 TR002015NCATS NIH HHS TL1 TR002016NCATS NIH HHS UL1 TR000127NCATS NIH HHS UL1 TR002014NIAID NIH HHS R21 AI144765NIDDK NIH HHS R01 DK099364
6 · The paper itself

Abstract

Rapid infant growth increases the risk for adult obesity. The gut microbiome is associated with early weight status; however, no study has examined how interactions between microbial and host ribonucleic acid (RNA) expression influence infant growth. We hypothesized that dynamics in infant stool micro-ribonucleic acids (miRNAs) would be associated with both microbial activity and infant growth via putative metabolic targets. Stool was collected twice from 30 full-term infants, at 1 month and again between 6 and 12 months. Stool RNA were measured with high-throughput sequencing and aligned to human and microbial databases. Infant growth was measured by weight-for-length z-score at birth and 12 months. Increased RNA transcriptional activity of Clostridia (R = 0.55; Adj p = 3.7E-2) and Burkholderia (R = -0.820, Adj p = 2.62E-3) were associated with infant growth. Of the 25 human RNAs associated with growth, 16 were miRNAs. The miRNAs demonstrated significant target enrichment (Adj p < 0.05) for four metabolic pathways. There were four associations between growth-related miRNAs and growth-related phyla. We have shown that longitudinal trends in gut microbiota activity and human miRNA levels are associated with infant growth and the metabolic targets of miRNAs suggest these molecules may regulate the biosynthetic landscape of the gut and influence microbial activity.

Indexed as

FecesFemaleFollow-Up StudiesGastrointestinal MicrobiomeGene Expression ProfilingGrowth and DevelopmentHumansInfantMalePennsylvaniaInfant growthmicrobiomemiRNAs

Identifiers

PMID33407969
PMCPMC8675179
OpenAlexW3118949760

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.