Evidence map›Paper›PMID 33407762›Full record

ArticleJournal of experimental & clinical cancer research : CR2021

Impact of the acidic environment on gene expression and functional parameters of tumors in vitro and in vivo.

Mandy Rauschner, Luisa Lange, Thea Hüsing, Sarah Reime, Alexander Nolze, Marcel Maschek, Oliver Thews, Anne Riemann

Open access · goldAbstract read
In one paragraph

Article in Journal of experimental & clinical cancer research : CR, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 28 citations in OpenAlex.

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  5. pH-regulated single cell migration.Pflugers Archiv : European journal of physiology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Mandy RauschnerInstitute of Physiology, University Halle-Wittenberg, Magdeburger Str. 6, 06112, Halle (Saale), Germany.
Luisa LangeInstitute of Physiology, University Halle-Wittenberg, Magdeburger Str. 6, 06112, Halle (Saale), Germany.
Thea HüsingInstitute of Physiology, University Halle-Wittenberg, Magdeburger Str. 6, 06112, Halle (Saale), Germany.
Sarah ReimeInstitute of Physiology, University Halle-Wittenberg, Magdeburger Str. 6, 06112, Halle (Saale), Germany.
Alexander NolzeInstitute of Physiology, University Halle-Wittenberg, Magdeburger Str. 6, 06112, Halle (Saale), Germany.
Marcel MaschekInstitute of Physiology, University Halle-Wittenberg, Magdeburger Str. 6, 06112, Halle (Saale), Germany.
Oliver ThewsInstitute of Physiology, University Halle-Wittenberg, Magdeburger Str. 6, 06112, Halle (Saale), Germany.
Anne RiemannInstitute of Physiology, University Halle-Wittenberg, Magdeburger Str. 6, 06112, Halle (Saale), Germany. anne.riemann@medizin.uni-halle.de.
Martin Luther University Halle-Wittenberg · DE

Funding

Deutsche Forschungsgemeinschaft TH 482/6-1
6 · The paper itself

Abstract

backgroundThe low extracellular pH (pH

methodsGene expression was analyzed in AT1 prostate and Walker-256 mammary carcinoma of the rat by Next Generation Sequencing (NGS), qPCR and Western blot. In addition, the impact of acidosis on tumor cell migration, adhesion, proliferation, cell death and mitochondrial activity was analyzed.

resultsNGS analyses revealed that 147 genes were uniformly regulated in both cell lines (in vitro) and 79 genes in both experimental tumors after 24 h at low pH. A subset of 25 genes was re-evaluated by qPCR and Western blot. Low pH consistently upregulated Aox1, Gls2, Gstp1, Ikbke, Per3, Pink1, Tlr5, Txnip, Ypel3 or downregulated Acat2, Brip1, Clspn, Dnajc25, Ercc6l, Mmd, Rif1, Zmpste24 whereas hypoxia alone led to a downregulation of most of the genes. Direct incubation at low pH reduced tumor cell adhesion whereas acidic pre-incubation increased the adhesive potential. In both tumor lines acidosis induced a G1-arrest (in vivo) of the cell cycle and a strong increase in necrotic cell death (but not in apoptosis). The mitochondrial O

conclusionsThese data show that acidic pH

Indexed as

AcidosisAnimalsCell HypoxiaCell ProliferationGene Expression Regulation, NeoplasticHumansMaleRatsAcidosisGene expressionHypoxiaMigrationProliferation

Identifiers

PMID33407762
PMCPMC7786478
OpenAlexW3119348997

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.