Evidence map›Paper›PMID 33405298›Full record

ArticleJournal of clinical laboratory analysis2021

iTRAQ-based proteomic analysis of the molecular mechanisms and downstream effects of fatty acid synthase in osteosarcoma cells.

Dahua Fu, Shuochuan Liu, Jiaming Liu, Wenzhao Chen, Xinhua Long, Xuanyin Chen, Yang Zhou, Yibin Zheng, Shanhu Huang

Open access · goldAbstract read
In one paragraph

Article in Journal of clinical laboratory analysis, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.8field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. APOC1 promotes the progression of osteosarcoma by binding to MTCH2.Experimental and therapeutic medicine · 2023
    Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Dahua FuDepartment of Pharmacy, Zhangzhou health vocational college, Zhangzhou, China.
Shuochuan LiuQueen Mary school, Nanchang University, Nanchang, China.
Jiaming LiuDepartment of Orthopedic Surgery, The First Affiliated Hospital of Nanchang University, Nanchang, China.
Wenzhao ChenDepartment of Orthopedic Surgery, The First Affiliated Hospital of Nanchang University, Nanchang, China.
Xinhua LongDepartment of Emergency Surgery, The First Affiliated Hospital of Nanchang University, Nanchang, China.
Xuanyin ChenDepartment of Orthopedic Surgery, The First Affiliated Hospital of Nanchang University, Nanchang, China.
Yang ZhouDepartment of Orthopedic Surgery, The First Affiliated Hospital of Nanchang University, Nanchang, China.
Yibin ZhengDepartment of Orthopedic Surgery, The First Affiliated Hospital of Nanchang University, Nanchang, China.
Shanhu HuangDepartment of Orthopedic Surgery, The First Affiliated Hospital of Nanchang University, Nanchang, China.ORCID https://orcid.org/0000-0002-6977-4069
Nanchang University · CNZhangzhou Vocational and Technical College · CN

Funding

National Natural Science Foundation of China 81560435National Natural Science Foundation of China 81660442National Natural Science Foundation of China 81860472
6 · The paper itself

Abstract

backgroundFatty acid synthase (FASN) is a lipogenic enzyme that participates in tumor progression. We previously showed that FASN is dysregulated in OS malignancy, but the molecular mechanism(s) of these effects remained unclear.

methodsWe examined differentially expressed proteins (DEPs) in FASN-silenced osteosarcoma 143B cells and their parental cells by isobaric tags for relative and absolute quantitation (iTRAQ). Differentially expressed proteins were classified using GO and KEGG analysis. The association between FASN and heterogeneous nuclear ribonucleoprotein A1 (HNRNPA1) was confirmed using qPCR, Western blot, and immunohistochemistry. The function of HNRNPA1 in osteosarcoma was determined using CCK-8, colony formation, wound healing, transwell migration, and invasion assays.

resultsAmong the 4971 identified proteins, 567 DEPs (325 upregulated and 242 downregulated) were identified. The top 10 upregulated proteins comprised HIST1H2AB, INA, INTS5, MTCH2, EIF1, MAPK1IP1L, PXK, RPS27, PM20D2, and ZNF800, while the top 10 downregulated proteins comprised NDRG1, CNTLN, STON2, GDF7, HECTD3, HBB, TPM1, PPP4R4, PTTG1IP, and PLCB3. Bioinformatic analysis indicated that the DEPs were related to cellular processes, metabolic processes, biological regulation, binding, and catalytic activity. HNRNPA1 was dysregulated in FASN-silenced 143B and HOS cells. qPCR, Western blot, and immunohistochemistry showed that FASN expression positively correlates with HNRNPA1 expression. Further studies indicated that HNRNPA1 correlates with OS diagnosis and prognosis. And HNRNPA1 silence inhibits the proliferation, migration, and invasion in OS cells.

conclusionHNRNPA1 acts as targets downstream of FASN and potential biomarker and oncogene in OS.

Indexed as

AdultBone NeoplasmsCell Line, TumorCell MovementCell ProliferationFatty Acid Synthase, Type IFemaleGene OntologyHeterogeneous Nuclear Ribonucleoprotein A1HumansMaleOsteosarcomaProteomicsYoung AdultFASN protein, humanFatty Acid Synthase, Type IHeterogeneous Nuclear Ribonucleoprotein A1hnRNPA1 protein, humanFASNHNRNPA1iTRAQ proteomic analysisosteosarcoma

Identifiers

PMID33405298
PMCPMC7957979
OpenAlexW3120807920

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.