Evidence map›Paper›PMID 33405202›Full record

ArticleJournal of neurovirology2021

Transcriptional signatures of Zika virus infection in astrocytes.

Blake Schouest, Tiffany A Peterson, Dawn M Szeltner, Elizabeth A Scheef, Melody Baddoo, Nathan Ungerleider, Erik K Flemington, Andrew G MacLean, Nicholas J Maness

Open access · hybridAbstract read
In one paragraph

Article in Journal of neurovirology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Offspring affected withEmerging microbes & infections · 2023
    Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Blake SchouestTulane National Primate Research Center, Tulane University, Covington, LA, USA.
Tiffany A PetersonTulane National Primate Research Center, Tulane University, Covington, LA, USA.
Dawn M SzeltnerTulane National Primate Research Center, Tulane University, Covington, LA, USA.
Elizabeth A ScheefTulane National Primate Research Center, Tulane University, Covington, LA, USA.
Melody BaddooDepartment of Pathology and Laboratory Medicine, Tulane University School of Medicine, New Orleans, LA, USA.
Nathan UngerleiderDepartment of Pathology and Laboratory Medicine, Tulane University School of Medicine, New Orleans, LA, USA.
Erik K FlemingtonDepartment of Pathology and Laboratory Medicine, Tulane University School of Medicine, New Orleans, LA, USA.
Andrew G MacLeanTulane National Primate Research Center, Tulane University, Covington, LA, USA.
Nicholas J ManessTulane National Primate Research Center, Tulane University, Covington, LA, USA. nmaness@tulane.edu.ORCID 0000-0002-9332-7891
Tulane University · US

Funding

Tulane NPRC SPF Sheltered Outdoor Enclosure ExpansionP51OD011104 · OD · TULANE UNIVERSITY OF LOUISIANA · PI L Lee HAMM · 2012 to 2026
$142.4M
Research Training in Experimental Medicine and PathologyT32OD011124 · OD · TULANE UNIVERSITY OF LOUISIANA · PI BLAIR, ROBERT, RAPPAPORT, JAY · 2012 to 2019
$2.7M
RPMS1 circular RNAs in EBV malignanciesR01CA243793 · NCI · TULANE UNIVERSITY OF LOUISIANA · PI FLEMINGTON, ERIK K · 2019 to 2023
$1.8M
Focused characterization of non-canonical T cells against SIVR21AI138701 · NIAID · TULANE UNIVERSITY OF LOUISIANA · PI MANESS, NICHOLAS JAMES · 2018 to 2019
$468k
Assessing the EBV circular RNAomeR21CA236549 · NCI · TULANE UNIVERSITY OF LOUISIANA · PI FLEMINGTON, ERIK K · 2019 to 2020
$362k
NCI NIH HHS R01 CA243793NCI NIH HHS R21 CA236549NIAID NIH HHS R21 AI138701NIH HHS P51 OD011104NIH HHS P51OD011104NIH HHS R21AI138701NIH HHS T32 OD011124
6 · The paper itself

Abstract

Astrocytes are an early and important target of Zika virus (ZIKV) infection in the developing brain, but the impacts of infection on astrocyte function remain controversial. Given that nonhuman primate (NHP) models of ZIKV infection replicate aspects of neurologic disease seen in human infections, we cultured primary astrocytes from the brain tissue of infant rhesus macaques and then infected the cells with Asian or African lineage ZIKV to identify transcriptional patterns associated with infection in these cells. The African lineage virus appeared to have greater infectivity and promote stronger antiviral signaling, but infection by either strain ultimately produced typical virus response patterns. Both viruses induced hypoxic stress, but the Asian lineage strain additionally had an effect on metabolic and lipid biosynthesis pathways. Together, these findings describe an NHP astrocyte model that may be used to assess transcriptional signatures following ZIKV infection.

Indexed as

TranscriptomeAnimalsAstrocytesBrainCells, CulturedMacaca mulattaZika VirusZika Virus InfectionAstrocytesNonhuman primatesRNA sequencingZika virus

Identifiers

PMID33405202
PMCPMC7921019
OpenAlexW3120634464

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.