Evidence map›Paper›PMID 33403645›Full record

ArticleJournal of applied genetics2021

A GWAS to identify the cereal cyst nematode (Heterodera filipjevi) resistance loci in diverse wheat prebreeding lines.

Abdelfattah Dababat, Mian Abdur Rehman Arif, Halil Toktay, Osameh Atiya, Sajid Shokat, Gul E-Orakci, Mustafa Imren, Sukhwinder Singh

Abstract read
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Article in Journal of applied genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
5.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Article
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  4. Genetic Analyses of Seed Longevity inPlants (Basel, Switzerland) · 2023
    Article
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  8. Mapping Resistance to ArgentineanInternational journal of molecular sciences · 2021
    Article
  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 3 countries.

Abdelfattah Dababat *International Maize and Wheat Improvement Centre, Turkey Office P.K. 39 Emek, 06511, Ankara, Turkey.
Mian Abdur Rehman Arif *Nuclear Institute for Agriculture and Biology, Faisalabad, 38000, Pakistan.
Halil ToktayFaculty of Agricultural Sciences and Technologies, Niğde Ömer Halisdemir University, Niğde, Turkey.
Osameh AtiyaFaculty of Agricultural Sciences and Technologies, Niğde Ömer Halisdemir University, Niğde, Turkey.
Sajid ShokatNuclear Institute for Agriculture and Biology, Faisalabad, 38000, Pakistan.
Gul E-OrakciInternational Maize and Wheat Improvement Centre, Turkey Office P.K. 39 Emek, 06511, Ankara, Turkey.
Mustafa ImrenFaculty of Agriculture, Bolu Abant Izzet Baysal University, Bolu, Turkey.
Sukhwinder SinghGeneshifters, 222 Mary Jena Lane, Pullman, WA, 99163, USA. suksinghseedwheat@gmail.com.ORCID http://orcid.org/0000-0001-7103-5065
Ipek University · TRNiğde Ömer Halisdemir Üniversitesi · TRNuclear Institute for Agriculture and Biology · PKBolu Abant İzzet Baysal University · TRWashington State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Yield losses because of cereal cyst nematodes could be as high as 92%, causing a bottleneck for wheat production. An integrated approach (application of pesticides, crop rotation, and use of host resistance) is needed to manage this devastating pathogen where resistant cultivars are considered most effective. This necessitates the identification of nematode-resistant sources in the available germplasm. Here, we report on the genetic mapping of nematode resistance in 255 diverse prebreeding lines (PBLs) employing an association mapping strategy. Altogether, seven additive quantitative trait loci (QTL) were identified on chromosomes 1A, 2A, 2B, 2D, 3A, 6B, and 6D explaining a maximum of 9.42% phenotypic variation where at least five QTL (on chromosomes 2A, 2B, 2D, 6B, and 6D) are located on the same chromosomes that harbor the already known nematode resistance genes. Resistant PBLs carried Aegilops squarrosa (436) in their pedigree which could be the possible source of positive alleles. To add to it, better yield performance of the identified nematode-resistant lines under stress conditions indicates that the germplasm can provide both nematode resistance and high-yielding cultivars.

Indexed as

TylenchoideaAnimalsDisease ResistanceEdible GrainGenetic Association StudiesPlant DiseasesQuantitative Trait LociTriticumBread WheatCyst nematodeHeterodera filipjeviPre-breeding germplasmQuantitative trait loci

Identifiers

PMID33403645
OpenAlexW3120962525

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.