Evidence map›Paper›PMID 33403589›Full record

ArticleJournal of molecular neuroscience : MN2021

Differential DNA Methylation Profiles in Patients with Temporal Lobe Epilepsy and Hippocampal Sclerosis ILAE Type I.

Wang Zhang, Haiyang Wang, Binchao Liu, Miaomiao Jiang, Yifei Gu, Shi Yan, Xian Han, Alicia Y Hou, Chongyang Tang, Zhenfeng Jiang and 3 more

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of molecular neuroscience : MN, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Review
  6. Complexity in Genetic Epilepsies: A Comprehensive Review.International journal of molecular sciences · 2023
    Review
  7. Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. DNA methylation and regulation of gene expression: Guardian of our health.The Nucleus : an international journal of cytology and allied topics · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Wang ZhangDepartment of Neurosurgery of the First Affiliate Hospital, Harbin Medical University, Harbin, China.
Haiyang WangDepartment of Neurosurgery of the First Affiliate Hospital, Harbin Medical University, Harbin, China.
Binchao LiuDepartment of Neurosurgery of Xing Tai People's Hospital, Xing Tai, China.
Miaomiao JiangDepartment of Pathology of the First Affiliate Hospital, Harbin Medical University, Harbin, China.
Yifei GuDepartment of Neurosurgery of the First Affiliate Hospital, Harbin Medical University, Harbin, China.
Shi YanDepartment of Neurosurgery of the First Affiliate Hospital, Harbin Medical University, Harbin, China.
Xian HanDepartment of Neurosurgery of the First Affiliate Hospital, Harbin Medical University, Harbin, China.
Alicia Y HouLillian S. Wells Department of Neurosurgery, University of Florida, Gainesville, Florida, USA.
Chongyang TangSanboBrain Hospital Capital Medical University, Beijing, China.
Zhenfeng JiangDepartment of Neurosurgery of the First Affiliate Hospital, Harbin Medical University, Harbin, China.
Hong ShenDepartment of Neurosurgery of the First Affiliate Hospital, Harbin Medical University, Harbin, China.
Meng NaDepartment of Neurosurgery of the First Affiliate Hospital, Harbin Medical University, Harbin, China. nameng2001@hotmail.com.
Zhiguo LinDepartment of Neurosurgery of the First Affiliate Hospital, Harbin Medical University, Harbin, China. linzhiguo@hrbmu.edu.cn.ORCID http://orcid.org/0000-0002-2920-4272
Harbin Medical University · CNCapital Medical University · CNHebei Medical University · CNUniversity of Florida · US

Funding

Certificate of China Postdoctoral Science Foundation Grant 2018M631951Financial Assistance under Heilongjiang Postdoctoral Fund LBH-Z17144National Aerospace Science Foundation of China 81571646National Natural Science Foundation of China 81601130Natural Science Foundation of Heilongjiang Province LH2019H082
6 · The paper itself

Abstract

Hippocampal sclerosis (HS) is one of the most prevalent pathological types of temporal lobe epilepsy (TLE), and it significantly affects patient prognoses. The methylation of DNA plays an important role in the development of epilepsy. However, few studies have focused on HS subtypes to determine DNA methylation profiles in TLE. This study aimed to determine the pathogenesis of TLE from an epigenetic perspective in patients with TLE-HS type I (TLE-HSTI) and TLE without HS (TLE-nHS) using whole-genome bisulfite sequencing (WGBS). We defined 1171 hypermethylated and 2537 hypomethylated regions and found 632 differentially methylated genes (DMG) in the promoter region that were primarily involved in the regulation of various aspects of epilepsy development. Twelve DMG overlapped with differentially expressed genes (DEG) in the promoter region, and RT-qPCR findings revealed significant overexpression of the SBNO2, CBX3, RASAL3, and TMBIM4 genes in TLE-HSTI. We present the first systematic analysis of methylation profiles of TLE-HSTI and TLE-nHS from an epigenetic perspective using WGBS. Overall, our preliminary data highlight the underlying mechanism of TLE-HSTI, providing a new perspective for guiding treatment of TLE.

Indexed as

DNA MethylationAdolescentAdultChromosomal Proteins, Non-HistoneEpigenomeEpilepsy, Temporal LobeFemaleHippocampusHumansMaleMembrane Proteinsras GTPase-Activating ProteinsRepressor ProteinsSclerosisCBX3 protein, humanChromosomal Proteins, Non-HistoneMembrane ProteinsRASAL3 protein, humanras GTPase-Activating ProteinsRepressor ProteinsSBNO2 protein, humanTMBIM4 protein, humanDifferentially methylated regionsDNA methylationHippocampal sclerosisTemporal lobe epilepsyWhole-genome bisulfite sequencing

Identifiers

PMID33403589
OpenAlexW3120343511

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.