Evidence map›Paper›PMID 33402677›Full record

ArticleNPJ biofilms and microbiomes2021

Weaponizing volatiles to inhibit competitor biofilms from a distance.

Qihui Hou, Alona Keren-Paz, Elisa Korenblum, Rela Oved, Sergey Malitsky, Ilana Kolodkin-Gal

Abstract read
In one paragraph

Article in NPJ biofilms and microbiomes, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Review
  2. A multi-strain, biofilm-forming cocktail ofMicrobiology spectrum · 2025
    Article
  3. Article
  4. Review
  5. Volatiles emitted by the entomopathogenic fungusFrontiers in fungal biology · 2025
    Article
  6. Article
  7. Article
  8. The Utilization ofMicroorganisms · 2024
    Article
  9. Root volatiles manipulate bacterial biofilms.Nature ecology & evolution · 2024
    Article
  10. Article
  11. Review
  12. Isolation and identification of antagonisticFrontiers in microbiology · 2023
    Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Qihui HouDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Alona Keren-PazDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Elisa KorenblumDepartment of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel.
Rela OvedDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Sergey MalitskyMetabolic Profiling Unit, Weizmann Institute of Science, Rehovot, Israel. sergey.malitsky@weizmann.ac.il.ORCID http://orcid.org/0000-0003-4619-7219
Ilana Kolodkin-GalDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel. ilana.kolodkin-gal@weizmann.ac.il.ORCID http://orcid.org/0000-0002-8464-5660

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The soil bacterium Bacillus subtilis forms beneficial biofilms that induce plant defences and prevent the growth of pathogens. It is naturally found in the rhizosphere, where microorganisms coexist in an extremely competitive environment, and thus have evolved a diverse arsenal of defence mechanisms. In this work, we found that volatile compounds produced by B. subtilis biofilms inhibited the development of competing biofilm colonies, by reducing extracellular matrix gene expression, both within and across species. This effect was dose-dependent, with the structural defects becoming more pronounced as the number of volatile-producing colonies increased. This inhibition was mostly mediated by organic volatiles, and we identified the active molecules as 3-methyl-1-butanol and 1-butanol. Similar results were obtained with biofilms formed by phylogenetically distinct bacterium sharing the same niche, Escherichia coli, which produced the biofilm-inhibiting 3-methyl-1-butanol and 2-nonanon. The ability of established biofilms to inhibit the development and spreading of new biofilms from afar might be a general mechanism utilized by bacterial biofilms to protect an occupied niche from the invasion of competing bacteria.

Indexed as

1-ButanolBacillus subtilisBacterial ProteinsBiofilmsEscherichia coliExtracellular Polymeric Substance MatrixGene Expression Regulation, BacterialKetonesMicrobial InteractionsMicrobiotaPentanolsVolatile Organic Compounds1-Butanol2-nonanoneBacterial Proteinsisopentyl alcoholKetonesPentanolsVolatile Organic Compounds

Identifiers

PMID33402677
PMCPMC7785731

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.