Evidence map›Paper›PMID 33402530›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Measuring the subcellular compartmentalization of viral infections by protein complementation assay.

Juliette Fernandez, Cédric Hassen-Khodja, Virginie Georget, Thierry Rose, Yves Jacob, Yves L Janin, Sébastien Nisole, Pierre-Olivier Vidalain, Nathalie J Arhel

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.7field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Juliette FernandezInstitut de Recherche en Infectiologie de Montpellier, CNRS, UMR 9004 Université de Montpellier, 34090 Montpellier, France.ORCID 0000-0003-2969-8150
Cédric Hassen-KhodjaMontpellier Ressources Imagerie, BioCampus Montpellier, CNRS, INSERM, Université de Montpellier, 34090 Montpellier, France.ORCID 0000-0002-7715-7167
Virginie GeorgetMontpellier Ressources Imagerie, BioCampus Montpellier, CNRS, INSERM, Université de Montpellier, 34090 Montpellier, France.ORCID 0000-0002-6998-3100
Thierry RoseUnité de Biologie Cellulaire des Lymphocytes, Institut Pasteur, INSERM 1221, 75015 Paris, France.ORCID 0000-0001-8863-0207
Yves JacobUnité de Génétique Moléculaire des Virus à Acide Ribonucléique, Institut Pasteur, CNRS UMR 3569, 75015 Paris, France.ORCID 0000-0001-9125-2374
Yves L JaninUnité de Chimie et Biocatalyse, Institut Pasteur, CNRS UMR 3523, 75724 Paris, France.ORCID 0000-0003-3019-9842
Sébastien NisoleInstitut de Recherche en Infectiologie de Montpellier, CNRS, UMR 9004 Université de Montpellier, 34090 Montpellier, France.ORCID 0000-0001-9793-419X
Pierre-Olivier VidalainCentre International de Recherche en Infectiologie, Université de Lyon, INSERM U1111, Université Claude Bernard Lyon 1, CNRS UMR 5308, École Normale Supérieure de Lyon, 69342 Lyon, France.ORCID 0000-0003-3082-7407
Nathalie J ArhelInstitut de Recherche en Infectiologie de Montpellier, CNRS, UMR 9004 Université de Montpellier, 34090 Montpellier, France; nathalie.arhel@irim.cnrs.fr.
Centre National de la Recherche Scientifique · FRInserm · FRUniversité Claude Bernard Lyon 1 · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The recent emergence and reemergence of viruses in the human population has highlighted the need to develop broader panels of therapeutic molecules. High-throughput screening assays opening access to untargeted steps of the viral replication cycle will provide powerful leverage to identify innovative antiviral molecules. We report here the development of an innovative protein complementation assay, termed αCentauri, to measure viral translocation between subcellular compartments. As a proof of concept, the Centauri fragment was either tethered to the nuclear pore complex or sequestered in the nucleus, while the complementary α fragment (<16 amino acids) was attached to the integrase proteins of infectious HIV-1. The translocation of viral ribonucleoproteins from the cytoplasm to the nuclear envelope or to the nucleoplasm efficiently reconstituted superfolder green fluorescent protein or NanoLuc αCentauri reporters. These fluorescence- or bioluminescence-based assays offer a robust readout of specific steps of viral infection in a multiwell format that is compatible for high-throughput screening and is validated by a short hairpin RNA-based prototype screen.

Indexed as

Cell LineCell NucleusCytoplasmGreen Fluorescent ProteinsHeLa CellsHigh-Throughput Screening AssaysHIV InfectionsHumansNuclear EnvelopeNuclear PoreRibonucleoproteinsVirus DiseasesVirus ReplicationGreen Fluorescent ProteinsRibonucleoproteinssubcellular compartmentstechnological developmentviruses

Identifiers

PMID33402530
PMCPMC7812837
OpenAlexW3118690589

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.