Evidence map›Paper›PMID 33402128›Full record

ArticleBMC cancer2021

Low expression of ferritinophagy-related NCOA4 gene in relation to unfavorable outcome and defective immune cells infiltration in clear cell renal carcinoma.

Yanhua Mou, Jinchun Wu, Yao Zhang, Omar Abdihamid, Chaojun Duan, Bin Li

Open access · goldAbstract read
In one paragraph

Article in BMC cancer, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
20.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 126 citations in OpenAlex.

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16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Yanhua MouDepartment of Oncology, Xiangya Hospital, Central South University, Changsha, Hunan, 410008, P.R. China.
Jinchun WuDepartment of Oncology, Xiangya Hospital, Central South University, Changsha, Hunan, 410008, P.R. China.
Yao ZhangState Key Laboratory of Reproductive Medicine and Department of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, Jiangsu, 210029, P.R. China.
Omar AbdihamidDepartment of Oncology, Xiangya Hospital, Central South University, Changsha, Hunan, 410008, P.R. China.
Chaojun DuanInstitute of Medical Sciences, Key Laboratory of Cancer Proteomics of Chinese Ministry of Health, Xiangya Hospital, Central South University, Changsha, Hunan, 410008, P.R. China.
Bin LiDepartment of Oncology, Xiangya Hospital, Central South University, Changsha, Hunan, 410008, P.R. China. bincsuxy@csu.edu.cn.
Xiangya Hospital Central South University · CNCentral South University · CNJiangsu Province Hospital · CN

Funding

National Natural Science Foundation of China 81200366National Natural Science Foundation of China 81702278National Natural Science Foundation of China 81974367National Natural Science Foundation of China (CN) 81572281Province Natural Science Foundation of Hunan No.14JJ6004the Key Subject Education Department of Hunan [2012]594
6 · The paper itself

Abstract

backgroundClear cell renal cell carcinoma is susceptible to ferroptosis, and immunotherapy is recently recommended as a priority for the initial treatment of metastatic clear cell renal carcinoma. Increased ferroptosis and immune activation can synergistically reinforce each other in killing cancer cells. NCOA4 depletion can eliminate iron accumulation and thus weaken ferroptosis. Here, we aim to identify and validate the association between NCOA4 expression, clinicopathologic characteristics, and overall survival in ccRCC by using The Cancer Genome Atlas and Gene Expression Omnibus databases. We further analyze the interacted proteins of NCOA4 and infiltrated immune cells via TIMER and GEPIA databases.

methodsNCOA4 expression in clear cell renal carcinoma (ccRCC) tissues and normal adjacent tissues in The Cancer Genome Atlas (TCGA) data were primarily screened, and further validated in another independent cohort from the gene expression omnibus (GEO) database and human protein atlas. The relationships of NCOA4 expression and clinicopathologic parameters and overall survival (OS) were assessed using multivariate methods and Kaplan-Meier survival curves. And the proteins network with which NCOA4 interacted were also built using the online STRING website. Meanwhile, we use TIMER and GEPIA databases to investigate the relationships between NCOA4 expression and infiltrated immune cells and their corresponding gene marker sets.

resultsContrast to normal tissue, NCOA4 expression was lower in ccRCC tumor tissue(p < 0.05). Lower NCOA4 expression was closely associated with high-grade malignancy and advanced TNM stage. Univariate and multivariate analysis indicated the overall survival of ccRCC cases with low NCOA4 level is shorter than those of patients with high NCOA4 expression (p < 0.05). FTL and FTH1 were the important proteins interacting with NCOA4. ccRCC with NCOA4 deficiency presented the paucity of infiltrated immune cells and their matching marker sets, including CD8+ T cells.

conclusionDeficient NCOA4 expression was related to disease progression and poor prognosis, as well as impaired infiltration of immune cells in ccRCC.

Indexed as

AutophagyAdultAgedAged, 80 and overBiomarkers, TumorCarcinoma, Renal CellCase-Control StudiesDisease ProgressionFemaleFerritinsFollow-Up StudiesGene Expression Regulation, NeoplasticHumansKidney NeoplasmsLymphocytes, Tumor-InfiltratingMaleBiomarkers, TumorFerritinsNCOA4 protein, humanNuclear Receptor CoactivatorsClear cell renal carcinomaFerritinophagyFerroptosisImmune cellsNCOA4

Identifiers

PMID33402128
PMCPMC7786469
OpenAlexW3118388357

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.