Evidence map›Paper›PMID 33399580›Full record

ArticleJournal of synchrotron radiation2021

Fast digital lossy compression for X-ray ptychographic data.

Panpan Huang, Ming Du, Mike Hammer, Antonino Miceli, Chris Jacobsen

Abstract read
In one paragraph

Article in Journal of synchrotron radiation, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Upscaling X-ray nanoimaging to macroscopic specimens.Journal of applied crystallography · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Panpan HuangDepartment of Physics and Astronomy, Northwestern University, Evanston, IL 60208, USA.
Ming DuAdvanced Photon Source, Argonne National Laboratory, Argonne, IL 60439, USA.
Mike HammerAdvanced Photon Source, Argonne National Laboratory, Argonne, IL 60439, USA.ORCID 0000-0002-1273-3653
Antonino MiceliAdvanced Photon Source, Argonne National Laboratory, Argonne, IL 60439, USA.ORCID 0000-0001-5994-5402
Chris JacobsenDepartment of Physics and Astronomy, Northwestern University, Evanston, IL 60208, USA.ORCID 0000-0001-8562-0353

Funding

Sub-micrometer x-ray tomography for neuroanatomyU01MH109100 · NIMH · NORTHWESTERN UNIVERSITY · PI JACOBSEN, CHRIS JOHNSON, KASTHURI, NARAYANAN · 2015 to 2017
$2.0M
Development of Sub 100 nm Resolution X-ray Nanotomography of Centimeter-Sized TissuesR01MH115265 · NIMH · NORTHWESTERN UNIVERSITY · PI JACOBSEN, CHRIS JOHNSON · 2018 to 2021
$1.5M
NIMH NIH HHS R01 MH115265NIMH NIH HHS U01 MH109100
6 · The paper itself

Abstract

Increases in X-ray brightness from synchrotron light sources lead to a requirement for higher frame rates from hybrid pixel array detectors (HPADs), while also favoring charge integration over photon counting. However, transfer of the full uncompressed data will begin to constrain detector design, as well as limit the achievable continuous frame rate. Here a data compression scheme that is easy to implement in a HPAD's application-specific integrated circuit (ASIC) is described, and how different degrees of compression affect image quality in ptychography, a commonly employed coherent imaging method, is examined. Using adaptive encoding quantization, it is shown in simulations that one can digitize signals up to 16383 photons per pixel (corresponding to 14 bits of information) using only 8 or 9 bits for data transfer, with negligible effect on the reconstructed image.

Indexed as

lossy compressionpixel array detectorsX-ray ptychography

Identifiers

PMID33399580
PMCPMC7842218

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.