Evidence map›Paper›PMID 33398100›Full record

ArticleNature microbiology2021

Dinoflagellates alter their carbon and nutrient metabolic strategies across environmental gradients in the central Pacific Ocean.

Natalie R Cohen, Matthew R McIlvin, Dawn M Moran, Noelle A Held, Jaclyn K Saunders, Nicholas J Hawco, Michael Brosnahan, Giacomo R DiTullio, Carl Lamborg, John P McCrow and 3 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
16.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 116 citations in OpenAlex.

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  12. Nutrient colimitation is a quantitative, dynamic property of microbial populations.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  13. Light-regulated chloroplast morphodynamics in a single-celled dinoflagellate.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Natalie R CohenMarine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA. ncohen@whoi.edu.ORCID http://orcid.org/0000-0001-6156-9186
Matthew R McIlvinMarine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA.
Dawn M MoranMarine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA.
Noelle A HeldMarine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA.
Jaclyn K SaundersMarine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA.ORCID http://orcid.org/0000-0003-1023-6239
Nicholas J HawcoDepartment of Earth Science, University of Southern California, Los Angeles, CA, USA.
Michael BrosnahanBiology Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA.
Giacomo R DiTullioDepartment of Biology, College of Charleston, Charleston, SC, USA.ORCID http://orcid.org/0000-0002-3088-5423
Carl LamborgOcean Sciences Department, University of California, Santa Cruz, Santa Cruz, CA, USA.
John P McCrowMicrobial & Environmental Genomics, J. Craig Venter Institute, La Jolla, CA, USA.
Chris L DupontMicrobial & Environmental Genomics, J. Craig Venter Institute, La Jolla, CA, USA.ORCID http://orcid.org/0000-0002-0896-6542
Andrew E AllenMicrobial & Environmental Genomics, J. Craig Venter Institute, La Jolla, CA, USA. aallen@jcvi.org.
Mak A SaitoMarine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA. msaito@whoi.edu.ORCID http://orcid.org/0000-0001-6040-9295
Woods Hole Oceanographic Institution · USJ. Craig Venter Institute · USCollege of Charleston · USUniversity of California, Santa Cruz · USUniversity of Southern California · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Marine microeukaryotes play a fundamental role in biogeochemical cycling through the transfer of energy to higher trophic levels and vertical carbon transport. Despite their global importance, microeukaryote physiology, nutrient metabolism and contributions to carbon cycling across offshore ecosystems are poorly characterized. Here, we observed the prevalence of dinoflagellates along a 4,600-km meridional transect extending across the central Pacific Ocean, where oligotrophic gyres meet equatorial upwelling waters rich in macronutrients yet low in dissolved iron. A combined multi-omics and geochemical analysis provided a window into dinoflagellate metabolism across the transect, indicating a continuous taxonomic dinoflagellate community that shifted its functional transcriptome and proteome as it extended from the euphotic to the mesopelagic zone. In euphotic waters, multi-omics data suggested that a combination of trophic modes were utilized, while mesopelagic metabolism was marked by cytoskeletal investments and nutrient recycling. Rearrangement in nutrient metabolism was evident in response to variable nitrogen and iron regimes across the gradient, with no associated change in community assemblage. Total dinoflagellate proteins scaled with particulate carbon export, with both elevated in equatorial waters, suggesting a link between dinoflagellate abundance and total carbon flux. Dinoflagellates employ numerous metabolic strategies that enable broad occupation of central Pacific ecosystems and play a dual role in carbon transformation through both photosynthetic fixation in the euphotic zone and remineralization in the mesopelagic zone.

Indexed as

Carbon CycleDinoflagellidaPacific OceanPhylogenyProtozoan ProteinsSeawaterProtozoan Proteins

Identifiers

PMID33398100
OpenAlexW3120586110

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.