Evidence map›Paper›PMID 33398097›Full record

ArticleNature microbiology2021

RNA antitoxin SprF1 binds ribosomes to attenuate translation and promote persister cell formation in Staphylococcus aureus.

Marie-Laure Pinel-Marie, Régine Brielle, Camille Riffaud, Noëlla Germain-Amiot, Norbert Polacek, Brice Felden

Abstract read
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In one paragraph

Article in Nature microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
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  4. Development of a Potent and FunctionalJournal of medicinal chemistry · 2025
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  7. Article
  8. Review
  9. Regulatory RNAs inSynthetic and systems biotechnology · 2024
    Review
  10. Review
  11. Review
  12. Comparative analysis of five type II TA systems identified inFrontiers in cellular and infection microbiology · 2023
    Article
  13. Review
  14. Review
  15. Mechanism of action ofFrontiers in microbiology · 2023
    Article
  16. Article
  17. Thirty Years of sRNA-Mediated Regulation inInternational journal of molecular sciences · 2022
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Marie-Laure Pinel-Marie *Institut National de la Santé et de la Recherche Médicale, Bacterial Regulatory RNAs and Medicine UMR_S 1230, Rennes, France. marie-laure.pinel@univ-rennes1.fr.
Régine Brielle *Institut National de la Santé et de la Recherche Médicale, Bacterial Regulatory RNAs and Medicine UMR_S 1230, Rennes, France.
Camille RiffaudInstitut National de la Santé et de la Recherche Médicale, Bacterial Regulatory RNAs and Medicine UMR_S 1230, Rennes, France.
Noëlla Germain-AmiotInstitut National de la Santé et de la Recherche Médicale, Bacterial Regulatory RNAs and Medicine UMR_S 1230, Rennes, France.
Norbert PolacekDepartment of Chemistry and Biochemistry, Bern University, Bern, Switzerland.ORCID http://orcid.org/0000-0001-5317-3990
Brice FeldenInstitut National de la Santé et de la Recherche Médicale, Bacterial Regulatory RNAs and Medicine UMR_S 1230, Rennes, France. bfelden@univ-rennes1.fr.ORCID http://orcid.org/0000-0003-2803-0626

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Persister cells are a subpopulation of transiently antibiotic-tolerant bacteria associated with chronic infection and antibiotic treatment failure. Toxin-antitoxin systems have been linked to persister cell formation but the molecular mechanisms leading to bacterial persistence are mostly unknown. Here, we show that SprF1, a type I antitoxin, associates with translating ribosomes from the major human pathogen Staphylococcus aureus to reduce the pathogen's overall protein synthesis during growth. Under hyperosmotic stress, SprF1 levels increase due to enhanced stability, accumulate on polysomes and attenuate protein synthesis. Using an internal 6-nucleotide sequence on its 5'-end, SprF1 binds ribosomes and interferes with initiator transfer RNA binding, thus reducing translation initiation. An excess of messenger RNA displaces the ribosome-bound antitoxin, freeing the ribosomes for new translation cycles; however, this RNA antitoxin can also displace ribosome-bound mRNA. This translation attenuation mechanism, mediated by an RNA antitoxin, promotes antibiotic persister cell formation. The untranslated SprF1 is a dual-function RNA antitoxin that represses toxin expression by its 3'-end and fine-tunes overall bacterial translation via its 5'-end. These findings demonstrate a general function for a bacterial RNA antitoxin beyond protection from toxicity. They also highlight an RNA-guided molecular process that influences antibiotic persister cell formation.

Indexed as

Protein BiosynthesisBacterial ProteinsDrug Resistance, BacterialPolyribosomesRNA, MessengerStaphylococcus aureusToxin-Antitoxin SystemsBacterial ProteinsRNA, Messenger

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.