Evidence map›Paper›PMID 33397922›Full record

ArticleNature communications2021

A RAC-GEF network critical for early intestinal tumourigenesis.

K A Pickering, K Gilroy, J W Cassidy, S K Fey, A K Najumudeen, L B Zeiger, D F Vincent, D M Gay, J Johansson, R P Fordham and 23 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
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  14. Rac1, A Potential Target for Tumor Therapy.Frontiers in oncology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors at 11 institutions in 6 countries.

K A PickeringCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK.
K GilroyCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK.
J W CassidyCRUK Cambridge Institute, University of Cambridge, Robinson Way, Cambridge, CB2 ORE, UK.
S K FeyCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK.
A K NajumudeenCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK.ORCID http://orcid.org/0000-0002-3764-5721
L B ZeigerCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK.ORCID http://orcid.org/0000-0002-8712-3112
D F VincentCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK.
D M GayCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK.ORCID http://orcid.org/0000-0002-7407-1245
J JohanssonCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK.
R P FordhamCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK.
B MillerCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK.
W ClarkCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK.
A HedleyCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK.
E B UnalEMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRC), Barcelona, Spain.
C KielEMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRC), Barcelona, Spain.
E McGheeCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK.
L M MacheskyCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK.ORCID http://orcid.org/0000-0002-7592-9856
C NixonCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK.ORCID http://orcid.org/0000-0002-8085-2160
A E JohnssonThe Babraham Institute, Babraham Hall, Babraham, Cambridge, CB22 3AT, UK.ORCID http://orcid.org/0000-0002-0018-700X
M BainIBAHCM and School of Veterinary Medicine, 464 Bearsden Road, Bearsden, Glasgow, G61 1QH, UK.
D StrathdeeCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK.ORCID http://orcid.org/0000-0003-2959-4327
S R van HoofLaboratory for Experimental Oncology and Radiobiology (LEXOR), Center for Experimental Molecular Medicine (CEMM) and Cancer Center Amsterdam, Academic Medical Center, Amsterdam, The Netherlands.
J P MedemaLaboratory for Experimental Oncology and Radiobiology (LEXOR), Center for Experimental Molecular Medicine (CEMM) and Cancer Center Amsterdam, Academic Medical Center, Amsterdam, The Netherlands.
K I AndersonThe Francis Crick Institute, Mill Hill Laboratory, London, NW7 1AA, UK.ORCID http://orcid.org/0000-0002-9324-9598
S M BrachmannNovartis Institutes for BioMedical Research, Klybeckstrasse, 141, 4002, Basel, Switzerland.
V M StuckeNovartis Institutes for BioMedical Research, Klybeckstrasse, 141, 4002, Basel, Switzerland.
A MalliriCRUK Manchester Institute, 553 Wilmslow Road, Manchester, M20 4BX, UK.ORCID http://orcid.org/0000-0001-6848-090X
M DrysdaleBroad Institute, 415 Main St, Cambridge, MA, 02142, United States.
M TurnerThe Babraham Institute, Babraham Hall, Babraham, Cambridge, CB22 3AT, UK.ORCID http://orcid.org/0000-0002-3801-9896
L SerranoEMBL/CRG Systems Biology Research Unit, Centre for Genomic Regulation (CRC), Barcelona, Spain.ORCID http://orcid.org/0000-0002-5276-1392
K MyantEdinburgh Research Centre, The Institute of Genetics and Molecular Medicine, Crewe Road South, Edinburgh, EH4 2XR, UK. kevin.myant@igmm.ed.ac.uk.ORCID http://orcid.org/0000-0001-8017-1093
A D CampbellCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK. a.campbell@beatson.gla.ac.uk.ORCID http://orcid.org/0000-0003-3930-1276
O J SansomCRUK Beatson Institute, Garscube Estate, Switchback Road, Glasgow, G61 1BD, UK. o.sansom@beatson.gla.ac.uk.ORCID http://orcid.org/0000-0001-9540-3010
Cancer Research UK Scotland Institute · GBAmsterdam UMC Location University of Amsterdam · NLBabraham Institute · GBCentre for Genomic Regulation · ESNovartis (Switzerland) · CHBroad Institute · USCancer Research UK Manchester Institute · GBEdinburgh Cancer Research · GBThe Francis Crick Institute · GBUniversitat Pompeu Fabra · ESUniversity of Cambridge · GB

Funding

Biotechnology and Biological Sciences Research CouncilCancer Research UK 19166Cancer Research UK 20410Cancer Research UK 21139Cancer Research UK 24452Cancer Research UK 25808Cancer Research UK A15565Cancer Research UK A15673Cancer Research UK A17096Cancer Research UK A17196Cancer Research UK A21139Cancer Research UK A25045Cancer Research UK A29055Medical Research Council G117/424
6 · The paper itself

Abstract

RAC1 activity is critical for intestinal homeostasis, and is required for hyperproliferation driven by loss of the tumour suppressor gene Apc in the murine intestine. To avoid the impact of direct targeting upon homeostasis, we reasoned that indirect targeting of RAC1 via RAC-GEFs might be effective. Transcriptional profiling of Apc deficient intestinal tissue identified Vav3 and Tiam1 as key targets. Deletion of these indicated that while TIAM1 deficiency could suppress Apc-driven hyperproliferation, it had no impact upon tumourigenesis, while VAV3 deficiency had no effect. Intriguingly, deletion of either gene resulted in upregulation of Vav2, with subsequent targeting of all three (Vav2

Indexed as

Signal TransductionAdenomatous Polyposis Coli ProteinAnimalsCarcinogenesisGuanine Nucleotide Exchange FactorsHomeostasisIntestinesMiceMice, KnockoutMutationOrgan SpecificityPhenotypeProto-Oncogene Proteins c-vavProto-Oncogene Proteins p21(ras)rac1 GTP-Binding ProteinT-Lymphoma Invasion and Metastasis-inducing Protein 1Adenomatous Polyposis Coli ProteinGuanine Nucleotide Exchange FactorsHras protein, mouseProto-Oncogene Proteins c-vavProto-Oncogene Proteins p21(ras)rac1 GTP-Binding ProteinT-Lymphoma Invasion and Metastasis-inducing Protein 1Vav2 protein, mouseVav3 protein, mouse

Identifiers

PMID33397922
PMCPMC7782582
OpenAlexW3120269818

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.