Evidence map›Paper›PMID 33396489›Full record

ArticleGenes2020

Comparative Transcriptome Profiling of Ovary Tissue between Black Muscovy Duck and White Muscovy Duck with High- and Low-Egg Production.

Xiuyu Bao, Yiping Song, Tao Li, Shanshan Zhang, Lihua Huang, Shuya Zhang, Junting Cao, Xiaolin Liu, Jianqin Zhang

Open access · goldAbstract readComparative Study
In one paragraph

Article in Genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 29 citations in OpenAlex.

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  17. Distinct Signaling Pathways DistinguishFrontiers in cell and developmental biology · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Xiuyu BaoCollege of Animal Science and Technology, Northwest A&F University, Yangling 712100, China.
Yiping SongCollege of Animal Science and Technology, Northwest A&F University, Yangling 712100, China.
Tao LiCollege of Animal Science and Technology, Northwest A&F University, Yangling 712100, China.
Shanshan ZhangCollege of Animal Science and Technology, Northwest A&F University, Yangling 712100, China.
Lihua HuangCollege of Animal Science and Technology, Northwest A&F University, Yangling 712100, China.
Shuya ZhangCollege of Animal Science and Technology, Northwest A&F University, Yangling 712100, China.
Junting CaoCollege of Animal Science and Technology, Northwest A&F University, Yangling 712100, China.
Xiaolin LiuCollege of Animal Science and Technology, Northwest A&F University, Yangling 712100, China.
Jianqin ZhangCollege of Animal Science and Technology, Northwest A&F University, Yangling 712100, China.
Northwest A&F University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The egg-laying rate is an important indicator for evaluating fertility of poultry. In order to better understand the laying mechanism of Muscovy ducks, gene expression profiles and pathways of ovarian tissues in high- and low-laying black (BH and BL) and white Muscovy ducks (WH and WL) during the peak production period were performed by using RNA-seq. The total number of reads produced for each ovarian sample ranged from 44,344,070 to 47,963,328. A total of 113, 619 and 87 differentially expressed genes (DEGs) were identified in BH-vs-WH, BL-vs-BH and BL-vs-WL, respectively. Among them, 54, 356 and 49 genes were up regulated and 59, 263 and 38 genes were down regulated. In addition, there were only 10 up-regulated genes in WL-vs-WH. In the comparison of DEGs in black and white Muscovy ducks, two co-expressed DEG genes were detected between BH-vs-WH and BL-vs-WL and seven DEGs were co-expressed between BL-vs-BH and WL-vs-WH. The RNA-Seq data were confirmed to be reliable by qPCR. Numerous DEGs known to be involved in ovarian development were identified, including

Indexed as

Gene Expression ProfilingTranscriptomeAnimalsAvian ProteinsDucksFemaleGene OntologyHigh-Throughput Nucleotide SequencingMolecular Sequence AnnotationOvaryReproductionSignal TransductionZygoteAvian Proteinsgene expressionMuscovy duckovaryreproductiontranscriptome

Identifiers

PMID33396489
PMCPMC7824526
OpenAlexW3117452822

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.