Evidence map›Paper›PMID 33394061›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2021

Genetic characterization of qSCN10 from an exotic soybean accession PI 567516C reveals a novel source conferring broad-spectrum resistance to soybean cyst nematode.

Lijuan Zhou, Li Song, Yun Lian, Heng Ye, Mariola Usovsky, Jinrong Wan, Tri D Vuong, Henry T Nguyen

Abstract read
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In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Deciphering the genetic basis of resistance to soybean cyst nematode combining IBD and association mapping.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  4. Characterization of Virulence Phenotypes ofJournal of nematology · 2023
    Article
  5. Epistatic interaction between Rhg1-a and Rhg2 in PI 90763 confers resistance to virulent soybean cyst nematode populations.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Lijuan Zhou *Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA.
Li Song *Joint International Research Laboratory of Agriculture and Agri-Product Safety, Jiangsu Key Laboratory of Crop Genomics and Molecular Breeding, Yangzhou University, Yangzhou, 225009, China.
Yun LianInstitute of Industrial Crops, Henan Academy of Agricultural Sciences, Zhengzhou, 450002, China.
Heng YeDivision of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA.
Mariola UsovskyDivision of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA.
Jinrong WanDivision of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA.
Tri D VuongDivision of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA.
Henry T NguyenDivision of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA. nguyenhenry@missouri.edu.ORCID http://orcid.org/0000-0002-7597-1800
University of Missouri · USHenan Academy of Agricultural Sciences · CNYangzhou University · CN

Funding

National Institute of Food and Agriculture 2019-67013-29370USDA multiple state/hatch project MO-MSPS0002
6 · The paper itself

Abstract

key messageThe qSCN10 locus with broad-spectrum SCN resistance was fine-mapped to a 379-kb region on chromosome 10 in soybean accession PI 567516C. Candidate genes and potential application benefits of this locus were discussed. Soybean cyst nematode (SCN, Heterodera glycines Ichinohe) is one of the most devastating pests of soybean, causing significant yield losses worldwide every year. Genetic resistance has been the major strategy to control this pest. However, the overuse of the same genetic resistance derived primarily from PI 88788 has led to the genetic shifts in nematode populations and resulted in the reduced effectiveness in soybean resistance to SCN. Therefore, novel genetic resistance resources, especially those with broad-spectrum resistance, are needed to develop new resistant cultivars to cope with the genetic shifts in nematode populations. In this study, a quantitative trait locus (QTL) qSCN10 previously identified from a soybean landrace PI 567516C was confirmed to confer resistance to multiple SCN HG Types. This QTL was further fine-mapped to a 379-kb region. There are 51 genes in this region. Four of them are defense-related and were regulated by SCN infection, suggesting their potential role in mediating resistance to SCN. The phylogenetic and haplotype analyses of qSCN10 as well as other information indicate that this locus is different from other reported resistance QTL or genes. There was no yield drag or other unfavorable traits associated with this QTL when near-isogenic lines with and without qSCN10 were tested in a SCN-free field. Therefore, our study not only provides further insight into the genetic basis of soybean resistance to SCN, but also identifies a novel genetic resistance resource for breeding soybean for durable, broad-spectrum resistance to this pest.

Indexed as

Genetic MarkersPlant BreedingQuantitative Trait LociAnimalsChromosome MappingChromosomes, PlantDisease ResistanceGenetic LinkageGlycine maxPhylogenyPlant DiseasesTylenchoideaGenetic Markers

Identifiers

PMID33394061
OpenAlexW3118572319

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.