Evidence map›Paper›PMID 33392629›Full record

ArticleMicrobial ecology2021

Methanotrophic Community Detected by DNA-SIP at Bertioga's Mangrove Area, Southeast Brazil.

Débora do Carmo Linhares, Flávia Talarico Saia, Rubens Tadeu Delgado Duarte, Cristina Rossi Nakayama, Itamar Soares de Melo, Vivian Helena Pellizari

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Microbial ecology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 2 countries.

Débora do Carmo LinharesLaboratory of Industrial Biotechnology, Institute for Technological Research of São Paulo, 05508-901, São Paulo, SP, Brazil. deboraclinhares@gmail.com.ORCID https://orcid.org/0000-0002-9055-9187
Flávia Talarico SaiaInstitute of Marine Sciences, Federal University of São Paulo, Av. Dr. Carvalho de Mendonça, 144, Encruzilhada, Santos, SP, 11070-102, Brazil.ORCID https://orcid.org/0000-0002-9199-077X
Rubens Tadeu Delgado DuarteLaboratory of Molecular Ecology and Extremophiles, Department of Microbiology, Immunology and Parasitology, Federal University of Santa Catarina, Florianópolis, SC, 88040-900, Brazil.ORCID https://orcid.org/0000-0002-9939-3400
Cristina Rossi NakayamaInstitute of Environmental, Chemical and Pharmaceutical Sciences, Federal University of São Paulo, Rua São Nicolau, 210, Diadema, SP, 09913-030, Brazil.ORCID https://orcid.org/0000-0001-9428-585X
Itamar Soares de MeloEnvironmental Microbiology Lab, EMBRAPA Environment, Jaguariúna, SP, Brazil.ORCID https://orcid.org/0000-0003-2785-6725
Vivian Helena PellizariDepartment of Biological Oceanography, Oceanographic Institute, University of Sao Paulo, Praça do Oceanográfico, 191, 05508-120, Butantã, São Paulo-SP, Brazil.ORCID https://orcid.org/0000-0003-2757-6352
Universidade Federal de São Paulo · BRBrazilian Agricultural Research Corporation · BRSão Paulo State Technological College · BRUniversidade de São Paulo · BRUniversidade Federal de Santa Catarina · BR

Funding

Fundação de Amparo à Pesquisa do Estado de São Paulo 04/13910-6Fundação de Amparo à Pesquisa do Estado de São Paulo 2009/06601-0
6 · The paper itself

Abstract

Methanotrophic bacteria can use methane as sole carbon and energy source. Its importance in the environment is related to the mitigation of methane emissions from soil and water to the atmosphere. Brazilian mangroves are highly productive, have potential to methane production, and it is inferred that methanotrophic community is of great importance for this ecosystem. The scope of this study was to investigate the functional and taxonomic diversity of methanotrophic bacteria present in the anthropogenic impacted sediments from Bertioga´s mangrove (SP, Brazil). Sediment sample was cultivated with methane and the microbiota actively involved in methane oxidation was identified by DNA-based stable isotope probing (DNA-SIP) using methane as a labeled substrate. After 4 days (96 h) of incubation and consumption of 0.7 mmol of methane, the most active microorganisms were related to methanotrophs Methylomonas and Methylobacter as well as to methylotrophic Methylotenera, indicating a possible association of these bacterial groups within a methane-derived food chain in the Bertioga mangrove. The abundance of genera Methylomonas, able to couple methane oxidation to nitrate reduction, may indicate that under low dissolved oxygen tensions, some aerobic methanotrophs could shift to intraerobic methane oxidation to avoid oxygen starvation.

Indexed as

MethaneMicrobiotaBrazilDNAIsotopesOxidation-ReductionPhylogenySoil MicrobiologyDNAIsotopesMethaneOxidation of methane; pmoA; Methanotrophic bacteria; Methylotrophic bacteria; DGGE; Aerobic methanotrophs

Identifiers

PMID33392629
OpenAlexW3118737973

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.