Evidence map›Paper›PMID 33389238›Full record

ArticleAMB Express2021

Physiological characterization and transcriptome analysis of Pichia pastoris reveals its response to lignocellulose-derived inhibitors.

Barbara G Paes, Andrei Stecca Steindorff, Eduardo F Formighieri, Ildinete Silva Pereira, João Ricardo M Almeida

Open access · goldAbstract read
In one paragraph

Article in AMB Express, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 35 citations in OpenAlex.

  1. Pichia pastoris RNA-Sequencing and Data Analysis.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  2. Article
  3. Transcriptional Regulation Mechanisms in Adaptively EvolvedJournal of fungi (Basel, Switzerland) · 2025
    Article
  4. Article
  5. Article
  6. Applications of the Methylotrophic YeastJournal of fungi (Basel, Switzerland) · 2024
    Review
  7. Article
  8. Second generation Pichia pastoris strain and bioprocess designs.Biotechnology for biofuels and bioproducts · 2022
    Review
  9. Article
  10. RNA-Seq Based Transcriptome Analysis ofJournal of fungi (Basel, Switzerland) · 2022
    Article
  11. Recent progress in the microbial production of xylonic acid.World journal of microbiology & biotechnology · 2022
    Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Barbara G PaesLaboratory of Genetics and Biotechnology, Embrapa Agroenergia, Parque Estação Biológica, PqEB - W3 Norte Final s/no, Brasília, DF, 70.770-901, Brazil.
Andrei Stecca SteindorffLaboratory of Genetics and Biotechnology, Embrapa Agroenergia, Parque Estação Biológica, PqEB - W3 Norte Final s/no, Brasília, DF, 70.770-901, Brazil.
Eduardo F FormighieriLaboratory of Genetics and Biotechnology, Embrapa Agroenergia, Parque Estação Biológica, PqEB - W3 Norte Final s/no, Brasília, DF, 70.770-901, Brazil.
Ildinete Silva PereiraLaboratory of Genetics and Biotechnology, Embrapa Agroenergia, Parque Estação Biológica, PqEB - W3 Norte Final s/no, Brasília, DF, 70.770-901, Brazil.
João Ricardo M AlmeidaLaboratory of Genetics and Biotechnology, Embrapa Agroenergia, Parque Estação Biológica, PqEB - W3 Norte Final s/no, Brasília, DF, 70.770-901, Brazil. joao.almeida@embrapa.br.ORCID http://orcid.org/0000-0002-2902-5805
Universidade de Brasília · BRBrazilian Agricultural Research Corporation · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The negative effects of lignocellulose-derived inhibitors such as acetic acid and furaldehydes on microbial metabolism constitute a significant drawback to the usage of biomass feedstocks for the production of fuels and chemicals. The yeast Pichia pastoris has shown a great biotechnological potential for producing heterologous proteins and renewable chemicals. Despite its relevance, the performance of P. pastoris in presence of lignocellulose-derived inhibitors remains unclear. In this work, our results show for the first time the dose-dependent response of P. pastoris to acetic acid, furaldehydes (HMF and furfural), and sugarcane biomass hydrolysate, both at physiological and transcriptional levels. The yeast was able to grow in synthetic media with up to 6 g.L

Indexed as

Acetic acidFuraldehydesInhibitorsKomagataella phaffiiLignocellulosic hydrolysatePichia pastoris

Identifiers

PMID33389238
PMCPMC7779389
OpenAlexW3118727263

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.