Evidence map›Paper›PMID 33389129›Full record

ArticleHuman genetics2021

A missense allele of PEX5 is responsible for the defective import of PTS2 cargo proteins into peroxisomes.

Muhammad Ali, Shahid Y Khan, Tony A Rodrigues, Tânia Francisco, Xiaodong Jiao, Hang Qi, Firoz Kabir, Bushra Irum, Bushra Rauf, Asma A Khan and 15 more

Abstract read
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In one paragraph

Article in Human genetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Peroxisome Deficiency in Cochlear Hair Cells Causes Hearing Loss by Deregulating BK Channels.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2023
    Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors.

Muhammad AliThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore MD, USA.
Shahid Y Khan *The Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore MD, USA.
Tony A Rodrigues *Instituto de Biologia Celular E Molecular, Universidade Do Porto, Porto, Portugal.
Tânia FranciscoInstituto de Biologia Celular E Molecular, Universidade Do Porto, Porto, Portugal.
Xiaodong JiaoOphthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health, Bethesda, MD, USA.
Hang QiOphthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health, Bethesda, MD, USA.
Firoz KabirThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore MD, USA.
Bushra IrumThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore MD, USA.
Bushra RaufThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore MD, USA.
Asma A KhanNational Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan.
Azra MehmoodNational Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan.
Muhammad Asif NaeemNational Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan.
Muhammad Zaman AssirAllama Iqbal Medical College, University of Health Sciences, Lahore, Pakistan.
Muhammad Hassaan AliAllama Iqbal Medical College, University of Health Sciences, Lahore, Pakistan.
Mohsin ShahzadJinnah Burn and Reconstructive Surgery Center, Jinnah Hospital, Lahore, Pakistan.
Khaled K Abu-AmeroDepartment of Ophthalmology and Visual Sciences, College of Medicine, University of Illinois, Chicago, IL, USA.
Shehla Javed AkramAkram Medical Complex, Lahore, Pakistan.
Javed AkramUniversity of Health Sciences, Lahore, Pakistan.
Sheikh RiazuddinAllama Iqbal Medical College, University of Health Sciences, Lahore, Pakistan.
Saima RiazuddinDepartment of Otorhinolaryngology - Head and Neck Surgery, University of Maryland School Medicine, Baltimore, MD, USA.
Michael L RobinsonDepartment of Biology, Miami University, Oxford, OH, USA.
Myriam BaesDepartment of Pharmaceutical and Pharmacological Sciences, Lab of Cell Metabolism, University of Leuven, Leuven, Belgium.
Jorge E Azevedo *Instituto de Biologia Celular E Molecular, Universidade Do Porto, Porto, Portugal.
J Fielding Hejtmancik *Ophthalmic Genetics and Visual Function Branch, National Eye Institute, National Institutes of Health, Bethesda, MD, USA.
S Amer Riazuddin *The Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore MD, USA. riazuddin@jhmi.edu.

Funding

Inherited Ocular DiseasesZIAEY000272 · NEI · NATIONAL EYE INSTITUTE · PI HEJTMANCIK, JAMES F. · 2009 to 2025
$27.0M
Clinical/molecular Studies In Families With Congenital Or Hereditary CataractsZIAEY000281 · NEI · NATIONAL EYE INSTITUTE · PI HEJTMANCIK, JAMES F. · 2009 to 2025
$18.1M
Identification of Lens Function Through Analysis of Human CataractsR01EY022714 · NEI · JOHNS HOPKINS UNIVERSITY · PI RIAZUDDIN, AMER · 2014 to 2018
$2.0M
NEI NIH HHS R01EY022714
6 · The paper itself

Abstract

Peroxisomes, single-membrane intracellular organelles, play an important role in various metabolic pathways. The translocation of proteins from the cytosol to peroxisomes depends on peroxisome import receptor proteins and defects in peroxisome transport result in a wide spectrum of peroxisomal disorders. Here, we report a large consanguineous family with autosomal recessive congenital cataracts and developmental defects. Genome-wide linkage analysis localized the critical interval to chromosome 12p with a maximum two-point LOD score of 4.2 (θ = 0). Next-generation exome sequencing identified a novel homozygous missense variant (c.653 T > C; p.F218S) in peroxisomal biogenesis factor 5 (PEX5), a peroxisome import receptor protein. This missense mutation was confirmed by bidirectional Sanger sequencing. It segregated with the disease phenotype in the family and was absent in ethnically matched control chromosomes. The lens-specific knockout mice of Pex5 recapitulated the cataractous phenotype. In vitro import assays revealed a normal capacity of the mutant PEX5 to enter the peroxisomal Docking/Translocation Module (DTM) in the presence of peroxisome targeting signal 1 (PTS1) cargo protein, be monoubiquitinated and exported back into the cytosol. Importantly, the mutant PEX5 protein was unable to form a stable trimeric complex with peroxisomal biogenesis factor 7 (PEX7) and a peroxisome targeting signal 2 (PTS2) cargo protein and, therefore, failed to promote the import of PTS2 cargo proteins into peroxisomes. In conclusion, we report a novel missense mutation in PEX5 responsible for the defective import of PTS2 cargo proteins into peroxisomes resulting in congenital cataracts and developmental defects.

Indexed as

Mutation, MissensePeroxisomal Targeting SignalsAnimalsATP-Binding Cassette TransportersBiological Transport, ActiveCataractChromosomes, Human, Pair 12ConsanguinityExome SequencingFemaleGenetic LinkageHumansLens, CrystallineMaleMiceMice, KnockoutABCD3 protein, humanATP-Binding Cassette TransportersPeroxisomal Targeting SignalsPeroxisome-Targeting Signal 1 ReceptorPEX5 protein, humanSequestosome-1 ProteinSQSTM1 protein, human

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.