Evidence map›Paper›PMID 33388092›Full record

ArticleHereditas2021

Immunological analysis and differential genes screening of venous thromboembolism.

Li-Na Gao, Qiang Li, Jian-Qin Xie, Wan-Xia Yang, Chong-Ge You

Open access · goldAbstract read
In one paragraph

Article in Hereditas, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. COVID-19, Myocarditis and Pericarditis.Circulation research · 2023
    Review
  6. The Association Between Immune Cells and Venous Thromboembolism: A Causal Inference Based on Mendelian Randomization.Clinical and applied thrombosis/hemostasis : official journal of the International Academy of Clinical and Applied Thrombosis/Hemostasis
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Li-Na GaoLaboratory Medicine Center, Lanzhou University Second Hospital, Lanzhou, 730030, China.
Qiang LiDepartment of Gastroenterology, The First Hospital of Lanzhou University, Lanzhou, 730030, China.
Jian-Qin XieDepartment of Anesthesiology, Lanzhou University Second Hospital, Lanzhou, 730030, China.
Wan-Xia YangLaboratory Medicine Center, Lanzhou University Second Hospital, Lanzhou, 730030, China.
Chong-Ge YouLaboratory Medicine Center, Lanzhou University Second Hospital, Lanzhou, 730030, China. youchg@lzu.edu.cn.
Lanzhou University · CNLanzhou University Second Hospital · CNFirst Hospital of Lanzhou University · CN

Funding

Gansu Science and Technology Department 18YF1FA108Key Science and Technology Foundation of Gansu Province 1506RJZA230
6 · The paper itself

Abstract

purposeTo explore the pathogenesis of venous thromboembolism (VTE) and provide bioinformatics basis for the prevention and treatment of VTE.

methodsThe R software was used to obtain the gene expression profile data of GSE19151, combining with the CIBERSORT database, obtain immune cells and differentially expressed genes (DEGs) of blood samples of VTE patients and normal control, and analyze DEGs for GO analysis and KEGG pathway enrichment analysis. Then, the protein-protein interaction (PPI) network was constructed by using the STRING database, the key genes (hub genes) and immune differential genes were screened by Cytoscape software, and the transcription factors (TFs) regulating hub genes and immune differential genes were analyzed by the NetworkAnalyst database.

resultsCompared with the normal group, monocytes and resting mast cells were significantly expressed in the VTE group, while regulatory T cells were significantly lower. Ribosomes were closely related to the occurrence of VTE. 10 hub genes and immune differential genes were highly expressed in VTE. MYC, SOX2, XRN2, E2F1, SPI1, CREM and CREB1 can regulate the expressions of hub genes and immune differential genes.

conclusionsRibosomal protein family genes are most relevant to the occurrence and development of VTE, and the immune differential genes may be the key molecules of VTE, which provides new ideas for further explore the pathogenesis of VTE.

Indexed as

Computational BiologyGene Expression ProfilingGene Regulatory NetworksHumansMast CellsMonocytesOligonucleotide Array Sequence AnalysisProtein Interaction MapsT-Lymphocytes, RegulatoryTranscription FactorsVenous ThromboembolismTranscription FactorsBioinformatics analysisDifferentially expressed genesImmune cellImmune differential geneRibosomeVenous thromboembolism

Identifiers

PMID33388092
PMCPMC7778808
OpenAlexW3119543631

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.