Evidence map›Paper›PMID 33387047›Full record

ArticlePlanta2021

Comparative transcriptomic and metabolomic analyses of carotenoid biosynthesis reveal the basis of white petal color in Brassica napus.

Ledong Jia, Junsheng Wang, Rui Wang, Mouzheng Duan, Cailin Qiao, Xue Chen, Guoqiang Ma, Xintong Zhou, Meichen Zhu, Fuyu Jing and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Planta, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 37 citations in OpenAlex.

  1. A single nucleotide mutation ofHorticulture research · 2026
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  5. Multi-Omics Analysis Revealed thePlants (Basel, Switzerland) · 2024
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  9. The mechanism of white flower formation in Brassica rapa is distinct from that in other Brassica species.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  10. Flavonoid Synthesis-Related Genes Determine the Color of Flower Petals inInternational journal of molecular sciences · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Ledong Jia *Chongqing Rapeseed Engineering Research Center, College of Agronomy and Biotechnology, Southwest University, Chongqing, 400715, China.
Junsheng Wang *College of Life Science and Agronomy, Zhoukou Normal University, Zhoukou, 466001, China.
Rui Wang *Chongqing Rapeseed Engineering Research Center, College of Agronomy and Biotechnology, Southwest University, Chongqing, 400715, China.
Mouzheng DuanChongqing Rapeseed Engineering Research Center, College of Agronomy and Biotechnology, Southwest University, Chongqing, 400715, China.
Cailin QiaoChongqing Rapeseed Engineering Research Center, College of Agronomy and Biotechnology, Southwest University, Chongqing, 400715, China.
Xue ChenChongqing Rapeseed Engineering Research Center, College of Agronomy and Biotechnology, Southwest University, Chongqing, 400715, China.
Guoqiang MaChongqing Rapeseed Engineering Research Center, College of Agronomy and Biotechnology, Southwest University, Chongqing, 400715, China.
Xintong ZhouChongqing Rapeseed Engineering Research Center, College of Agronomy and Biotechnology, Southwest University, Chongqing, 400715, China.
Meichen ZhuChongqing Rapeseed Engineering Research Center, College of Agronomy and Biotechnology, Southwest University, Chongqing, 400715, China.
Fuyu JingChongqing Rapeseed Engineering Research Center, College of Agronomy and Biotechnology, Southwest University, Chongqing, 400715, China.
Shengsen ZhangChongqing Rapeseed Engineering Research Center, College of Agronomy and Biotechnology, Southwest University, Chongqing, 400715, China.
Cunmin QuChongqing Rapeseed Engineering Research Center, College of Agronomy and Biotechnology, Southwest University, Chongqing, 400715, China.
Jiana LiChongqing Rapeseed Engineering Research Center, College of Agronomy and Biotechnology, Southwest University, Chongqing, 400715, China. ljn1950@swu.edu.cn.ORCID http://orcid.org/0000-0002-1605-8528
Southwest University · CNZhoukou Normal University · CN

Funding

the 111 Project B12006the National Key Research and Development Plan 2018YFD0100504-05the National Natural Science Foundation of China 31830067
6 · The paper itself

Abstract

MAIN

conclusionThe molecular mechanism underlying white petal color in Brassica napus was revealed by transcriptomic and metabolomic analyses. Rapeseed (Brassica napus L.) is one of the most important oilseed crops worldwide, but the mechanisms underlying flower color in this crop are known less. Here, we performed metabolomic and transcriptomic analyses of the yellow-flowered rapeseed cultivar 'Zhongshuang 11' (ZS11) and the white-flowered inbred line 'White Petal' (WP). The total carotenoid contents were 1.778-fold and 1.969-fold higher in ZS11 vs. WP petals at stages S2 and S4, respectively. Our findings suggest that white petal color in WP flowers is primarily due to decreased lutein and zeaxanthin contents. Transcriptome analysis revealed 10,116 differentially expressed genes with a fourfold or greater change in expression (P-value less than 0.001) in WP vs. ZS11 petals, including 1,209 genes that were differentially expressed at four different stages and 20 genes in the carotenoid metabolism pathway. BnNCED4b, encoding a protein involved in carotenoid degradation, was expressed at abnormally high levels in WP petals, suggesting it might play a key role in white petal formation. The results of qRT-PCR were consistent with the transcriptome data. The results of this study provide important insights into the molecular mechanisms of the carotenoid metabolic pathway in rapeseed petals, and the candidate genes identified in this study provide a resource for the creation of new B. napus germplasms with different petal colors.

Indexed as

Brassica napusCarotenoidsFlowersMetabolomePigmentationTranscriptomeGene Expression Regulation, PlantCarotenoidsBnNCED4Carotenoid biosynthetic pathwayCarotenoid cleavage dioxygenasesLuteinRNA-seqZeaxanthin

Identifiers

PMID33387047
PMCPMC7778631
OpenAlexW3114584709

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.