Evidence map›Paper›PMID 33384957›Full record

ArticleFrontiers in oncology2020

Genotyping Squamous Cell Lung Carcinoma in Colombia (Geno1.1-CLICaP).

Andrés F Cardona, Alejandro Ruiz-Patiño, Oscar Arrieta, Luisa Ricaurte, Zyanya Lucia Zatarain-Barrón, July Rodriguez, Jenny Avila, Leonardo Rojas, Gonzalo Recondo, Feliciano Barron and 15 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in oncology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 9 institutions in 5 countries.

Andrés F CardonaClinical and Translational Oncology Group, Clínica del Country, Bogotá, Colombia.
Alejandro Ruiz-PatiñoDepartment of Medical Oncology, Foundation for Clinical and Applied Cancer Research - FICMAC, Bogotá, Colombia.
Oscar ArrietaThoracic Oncology Unit, Instituto Nacional de Cancerología (INCan), México City, México.
Luisa RicaurteDepartment of Medical Oncology, Foundation for Clinical and Applied Cancer Research - FICMAC, Bogotá, Colombia.
Zyanya Lucia Zatarain-BarrónThoracic Oncology Unit, Instituto Nacional de Cancerología (INCan), México City, México.
July RodriguezDepartment of Medical Oncology, Foundation for Clinical and Applied Cancer Research - FICMAC, Bogotá, Colombia.
Jenny AvilaDepartment of Medical Oncology, Foundation for Clinical and Applied Cancer Research - FICMAC, Bogotá, Colombia.
Leonardo RojasClinical and Translational Oncology Group, Clínica del Country, Bogotá, Colombia.
Gonzalo RecondoThoracic Oncology Section, Centro de Educación Médica e Investigaciones Clínicas - CEMIC, Buenos Aires, Argentina.
Feliciano BarronThoracic Oncology Unit, Instituto Nacional de Cancerología (INCan), México City, México.
Pilar ArchilaDepartment of Medical Oncology, Foundation for Clinical and Applied Cancer Research - FICMAC, Bogotá, Colombia.
Carolina SoteloDepartment of Medical Oncology, Foundation for Clinical and Applied Cancer Research - FICMAC, Bogotá, Colombia.
Melissa BravoDepartment of Medical Oncology, Foundation for Clinical and Applied Cancer Research - FICMAC, Bogotá, Colombia.
Nataly ZamudioDepartment of Medical Oncology, Foundation for Clinical and Applied Cancer Research - FICMAC, Bogotá, Colombia.
Luis CorralesOncology Department, Hospital San Juan de Dios, San José Costa Rica, Costa Rica.
Claudio MartínMedical Oncology Group, Fleming Institute, Buenos Aires, Argentina.
Christian RolfoMarlene and Stewart Greenebaum Comprehensive Cancer Center, University of Maryland School of Medicine, Baltimore, MD, United States.
Lucia ViolaThoracic Oncology Unit, Fundación Neumológica Colombiana, Bogotá, Colombia.
Hernán CarranzaClinical and Translational Oncology Group, Clínica del Country, Bogotá, Colombia.
Carlos VargasClinical and Translational Oncology Group, Clínica del Country, Bogotá, Colombia.
Jorge OteroClinical and Translational Oncology Group, Clínica del Country, Bogotá, Colombia.
Maritza BermudezDepartment of Medical Oncology, Foundation for Clinical and Applied Cancer Research - FICMAC, Bogotá, Colombia.
Tatiana GamezDepartment of Medical Oncology, Foundation for Clinical and Applied Cancer Research - FICMAC, Bogotá, Colombia.
Luis Eduardo PinoDepartment of Medical Oncology, Fundación Santa Fé de Bogotá, Bogotá, Colombia.
Rafael RosellDepartment of Medical Oncology, Catalan Institute of Oncology, Barcelona, Spain.
Foundation for Clinical and Applied Cancer Research · COUniversidad El Bosque · COInstituto Nacional de Cancerología · MXCentro de Educación Médica e Investigaciones Clínicas Norberto Quirno · ARFundación Neumológica Colombiana · COFundación Santa Fe de Bogotá · COInstitut Català d'Oncologia · ESInstituto Alexander Fleming · ARUniversity of Maryland, Baltimore · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundLung cancer is a public health problem, and squamous cell carcinoma (SCC) is the second most prevalent subtype of this neoplasm. Compared to other subtypes, including adenocarcinoma, SCC is less well understood in terms of molecular pathogenesis, limiting therapeutic options among targeted agents approved for other disease subgroups. In this study, we sought to characterize the SCC genomic profile using a validated Next Generation Sequencing (NGS) platform.

methodsThe comprehensive NGS assay (

resultsA total of 26 samples were included, median age was 67 years (r, 33-83) and 53.8% were men. Tobacco consumption was identified in all subjects (mean 34-year package). For first-line treatment 80.8% of patients received cisplatin or carboplatin plus gemcitabine. In terms of molecular profile, we identified a high prevalence of inactivating mutations in TP53 (61.5%), PIK3CA (34.6%), MLL2 (34.6%), KEAP1 (38.4%), and NOTCH1 (26.9%). PD-L1 expression ranged from negative, 1, 2-49, and ≥50% in 23.1, 38.5, 26.9, and 11.5%, respectively. Interestingly, the genetic alterations did not have an effect in PFS, OS or ORR in this study. However, PDL1 expression was higher among those who had mutations in TP53 (p = 0.037) and greater expression of PDL1 was related to PIK3CA alterations (p = 0.05).

conclusionsThe genomic profile of SCC encompasses important genes including TP53, PIK3CA and KEAP1. TP53 mutations could be associated with PDL1 expression, generating hypothesis regarding specific treatment options.

Indexed as

genotypeLatin Americalung cancerPD-L1squamous cell carcinomatherapeutic target

Identifiers

PMID33384957
PMCPMC7771515
OpenAlexW3110927896

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.