Evidence map›Paper›PMID 33382395›Full record

ArticleThe Journal of cell biology2021

Adaptability of the ubiquitin-proteasome system to proteolytic and folding stressors.

Jeremy J Work, Onn Brandman

Open access · hybridAbstract read
In one paragraph

Article in The Journal of cell biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. The Heat Shock Response as a Condensate Cascade.Journal of molecular biology · 2024
    Review
  5. Proteotoxic stress and the ubiquitin proteasome system.Seminars in cell & developmental biology · 2024
    Review
  6. The Protein Response of Salt-TolerantJournal of fungi (Basel, Switzerland) · 2024
    Article
  7. Article
  8. 26S proteasomes become stably activated upon heat shock when ubiquitination and protein degradation increase.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Jeremy J WorkDepartment of Biochemistry, Stanford University, Stanford, CA.
Onn BrandmanDepartment of Biochemistry, Stanford University, Stanford, CA.
Stanford University · US

Funding

Supplement to Enhance Wellness and Resiliency in the Graduate EnvironmentT32GM007276 · NIGMS · STANFORD UNIVERSITY · PI MORRISON, ASHBY J. · 1985 to 2023
$32.9M
Request for Support to Purchase Automated MicroscopeR01GM115968 · NIGMS · STANFORD UNIVERSITY · PI BRANDMAN, ONN · 2015 to 2023
$2.9M
NIGMS NIH HHS R01 GM115968NIGMS NIH HHS T32 GM007276
6 · The paper itself

Abstract

Aging, disease, and environmental stressors are associated with failures in the ubiquitin-proteasome system (UPS), yet a quantitative understanding of how stressors affect the proteome and how the UPS responds is lacking. Here we assessed UPS performance and adaptability in yeast under stressors using quantitative measurements of misfolded substrate stability and stress-dependent UPS regulation by the transcription factor Rpn4. We found that impairing degradation rates (proteolytic stress) and generating misfolded proteins (folding stress) elicited distinct effects on the proteome and on UPS adaptation. Folding stressors stabilized proteins via aggregation rather than overburdening the proteasome, as occurred under proteolytic stress. Still, the UPS productively adapted to both stressors using separate mechanisms: proteolytic stressors caused Rpn4 stabilization while folding stressors increased RPN4 transcription. In some cases, adaptation completely prevented loss of UPS substrate degradation. Our work reveals the distinct effects of proteotoxic stressors and the versatility of cells in adapting the UPS.

Indexed as

Protein FoldingProteolysisHeat-Shock ResponseProteasome Endopeptidase ComplexProtein AggregatesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsStress, PhysiologicalSubstrate SpecificityTranscription, GeneticUbiquitinUnfolded Protein ResponseProteasome Endopeptidase ComplexProtein AggregatesSaccharomyces cerevisiae ProteinsUbiquitin

Identifiers

PMID33382395
PMCPMC7780722
OpenAlexW3114709484

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.