Evidence map›Paper›PMID 33376201›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

The retromer is co-opted to deliver lipid enzymes for the biogenesis of lipid-enriched tombusviral replication organelles.

Zhike Feng, Jun-Ichi Inaba, Peter D Nagy

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Zhike FengDepartment of Plant Pathology, University of Kentucky, Lexington, KY 40546.
Jun-Ichi InabaDepartment of Plant Pathology, University of Kentucky, Lexington, KY 40546.
Peter D NagyDepartment of Plant Pathology, University of Kentucky, Lexington, KY 40546 pdnagy2@uky.edu.
University of Kentucky · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biogenesis of viral replication organelles (VROs) is critical for replication of positive-strand RNA viruses. In this work, we demonstrate that tomato bushy stunt virus (TBSV) and the closely related carnation Italian ringspot virus (CIRV) hijack the retromer to facilitate building VROs in the surrogate host yeast and in plants. Depletion of retromer proteins, which are needed for biogenesis of endosomal tubular transport carriers, strongly inhibits the peroxisome-associated TBSV and the mitochondria-associated CIRV replication in yeast and

Indexed as

Class III Phosphatidylinositol 3-KinasesEndosomal Sorting Complexes Required for TransportHost-Pathogen InteractionsLipid MetabolismLipidsPeroxisomesPhosphatidylinositol PhosphatesPhosphatidylinositolsRNA, ViralSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTombusvirusVesicular Transport ProteinsViral ProteinsViral Replication CompartmentsVirus ReplicationClass III Phosphatidylinositol 3-KinasesEndosomal Sorting Complexes Required for TransportLipidsPEP8 protein, S cerevisiaephosphatidylinositol 3-phosphatephosphatidylinositol 4-phosphatePhosphatidylinositol PhosphatesPhosphatidylinositolsRNA, ViralSaccharomyces cerevisiae ProteinsVesicular Transport ProteinsViral ProteinsVPS29 protein, S cerevisiaeVPS35 protein, S cerevisiaelipid biosynthesisretromer complexviral replication organellevirus–host interactionvirus replication

Identifiers

PMID33376201
PMCPMC7817191
OpenAlexW3117410016

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.