Evidence map›Paper›PMID 33375770›Full record

ArticleHaematologica2022

Genome-wide CRISPR screen identifies regulators of MAPK and MTOR pathways mediating sorafenib resistance in acute myeloid leukemia.

Alisa Damnernsawad, Daniel Bottomly, Stephen E Kurtz, Christopher A Eide, Shannon K McWeeney, Jeffrey W Tyner, Tamilla Nechiporuk

Open access · goldAbstract read
In one paragraph

Article in Haematologica, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.5field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Alisa DamnernsawadDepartment of Cell, Developmental and Cancer Biology, Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA; Department of Biology, Faculty of Science, Mahidol University, Bangkok.
Daniel BottomlyDivision of Bioinformatics and Computational Biology, Knight Cancer Institute, Oregon Health and Science University, Portland, OR.
Stephen E KurtzDivision of Hematology and Medical Oncology, Knight Cancer Institute, Oregon Health and Science University, Portland, OR.
Christopher A EideDivision of Hematology and Medical Oncology, Knight Cancer Institute, Oregon Health and Science University, Portland, OR.
Shannon K McWeeneyDivision of Bioinformatics and Computational Biology, Knight Cancer Institute, Oregon Health and Science University, Portland, OR.
Jeffrey W TynerDepartment of Cell, Developmental and Cancer Biology, Knight Cancer Institute, Oregon Health and Science University, Portland, OR, USA; Division of Hematology and Medical Oncology, Knight Cancer Institute, Oregon Health and Science University, Portland, OR. tynerj@ohsu.edu.
Tamilla NechiporukDepartment of Cell, Developmental and Cancer Biology, Knight Cancer Institute, Oregon Health and Science University, Portland, OR. nechipot@ohsu.edu.
Oregon Health & Science University · USMahidol University · TH

Funding

Understanding the origins of rapid recurrence of pancreatic cancer after resectionP30CA069533 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI Grace B Gill · 1997 to 2026
$60.5M
Tumor Intrinsic and Microenvironmental Mechanisms Driving Drug Combination Efficacy and Resistance in AMLU54CA224019 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI Jeffrey Wallace Tyner · 2017 to 2026
$13.9M
Functional Genomic Discovery of Pathway Targeted and Immune Modulatory Therapeutic Combinations in Hematologic MalignanciesU01CA217862 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI DRUKER, BRIAN J, TYNER, JEFFREY WALLACE · 2017 to 2021
$5.3M
Mechanisms of venetoclax combination activity in acute myeloid leukemiaR01CA262758 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI Stephen E Kurtz, Jeffrey Wallace Tyner · 2021 to 2026
$2.1M
Mechanisms of Drug Resistance in Acute Myeloid LeukemiaR50CA251708 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI NECHIPORUK, TAMILLA · 2020 to 2021
$174k
NCI NIH HHS P30 CA069533NCI NIH HHS R01 CA262758NCI NIH HHS R50 CA251708NCI NIH HHS U01 CA217862NCI NIH HHS U54 CA224019
6 · The paper itself

Abstract

Drug resistance impedes the long-term effect of targeted therapies in acute myeloid leukemia (AML), necessitating the identification of mechanisms underlying resistance. Approximately 25% of AML patients carry FLT3 mutations and develop post-treatment insensitivity to FLT3 inhibitors, including sorafenib. Using a genome-wide CRISPR screen, we identified LZTR1, NF1, TSC1 or TSC2, negative regulators of the MAPK and MTOR pathways, as mediators of sorafenib resistance. Analyses of ex vivo drug sensitivity assays in FLT3-ITD AML patient samples revealed lower expression of LZTR1, NF1, and TSC2 correlated with sorafenib sensitivity. Importantly, MAPK and/or MTOR complex1 (MTORC1) activity were upregulated in AML cells made resistant to several FLT3 inhibitors, including crenolanib, quizartinib, or sorafenib. These cells were sensitive to MEK inhibitors, and the combination of FLT3 and MEK inhibitors showed enhanced efficacy, suggesting its effectiveness in AML patients with FLT3 mutations and those with resistance to FLT3 inhibitors.

Indexed as

Antineoplastic AgentsLeukemia, Myeloid, AcuteSorafenibCell Line, TumorClustered Regularly Interspaced Short Palindromic Repeatsfms-Like Tyrosine Kinase 3HumansMAP Kinase Signaling SystemMutationNiacinamidePhenylurea CompoundsProtein Kinase InhibitorsTOR Serine-Threonine KinasesTranscription FactorsAntineoplastic Agentsfms-Like Tyrosine Kinase 3LZTR1 protein, humanMTOR protein, humanNiacinamidePhenylurea CompoundsProtein Kinase InhibitorsSorafenibTOR Serine-Threonine KinasesTranscription Factors

Identifiers

PMID33375770
PMCPMC8719098
OpenAlexW3116843665

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.