Evidence map›Paper›PMID 33375322›Full record

ArticleCancers2020

Gene Expression Signatures of a Preclinical Mouse Model during Colorectal Cancer Progression under Low-Dose Metronomic Chemotherapy.

Hung Ho-Xuan, Gerhard Lehmann, Petar Glazar, Foivos Gypas, Norbert Eichner, Kevin Heizler, Hans Jürgen Schlitt, Mihaela Zavolan, Nikolaus Rajewsky, Gunter Meister and 1 more

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 11 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. MIR210HG Accelerates the Progression of Colorectal Cancer and Affects the Function of Colorectal Cancer Cells by Downregulating miR-1226-3p.The Turkish journal of gastroenterology : the official journal of Turkish Society of Gastroenterology · 2024
    Article
  5. Review
  6. Article
  7. The emerging roles of circRNAs in cancer and oncology.Nature reviews. Clinical oncology · 2022
    Review
  8. Emerging Roles ofFrontiers in genetics · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Hung Ho-XuanBiochemistry Center Regensburg (BCR), Laboratory for RNA Biology, University of Regensburg, 93053 Regensburg, Germany.ORCID 0000-0003-2911-1559
Gerhard LehmannBiochemistry Center Regensburg (BCR), Laboratory for RNA Biology, University of Regensburg, 93053 Regensburg, Germany.
Petar GlazarLaboratory for Systems Biology of Gene Regulatory Elements, Berlin Institute for Medical Systems Biology, Max-Delbruck Center for Molecular Medicine, 10115 Berlin, Germany.
Foivos GypasBiozentrum, University of Basel, 4056 Basel, Switzerland.
Norbert EichnerBiochemistry Center Regensburg (BCR), Laboratory for RNA Biology, University of Regensburg, 93053 Regensburg, Germany.
Kevin HeizlerBiochemistry Center Regensburg (BCR), Laboratory for RNA Biology, University of Regensburg, 93053 Regensburg, Germany.
Hans Jürgen SchlittDept of Surgery, University Hospital Regensburg, 93053 Regensburg, Germany.ORCID 0000-0002-3874-0296
Mihaela ZavolanBiozentrum, University of Basel, 4056 Basel, Switzerland.
Nikolaus RajewskyLaboratory for Systems Biology of Gene Regulatory Elements, Berlin Institute for Medical Systems Biology, Max-Delbruck Center for Molecular Medicine, 10115 Berlin, Germany.
Gunter MeisterBiochemistry Center Regensburg (BCR), Laboratory for RNA Biology, University of Regensburg, 93053 Regensburg, Germany.ORCID 0000-0002-2098-9923
Christina HacklDept of Surgery, University Hospital Regensburg, 93053 Regensburg, Germany.
University of Regensburg · DEMax Delbrück Center · DEUniversity Hospital Regensburg · DEUniversity of Basel · CH

Funding

Bayerische Forschungsstiftung FORTiTherDeutsche Forschungsgemeinschaft FOR2127The European Union ITN RNATRAIN
6 · The paper itself

Abstract

Understanding the molecular signatures of colorectal cancer progression under chemotherapeutic treatment will be crucial for the success of future therapy improvements. Here, we used a xenograft-based mouse model to investigate, how whole transcriptome signatures change during metastatic colorectal cancer progression and how such signatures are affected by LDM chemotherapy using RNA sequencing. We characterized mRNAs as well as non-coding RNAs such as microRNAs, long non-coding RNAs and circular RNAs in colorectal-cancer bearing mice with or without LDM chemotherapy. Furthermore, we found that circZNF609 functions as oncogene, since over-expression studies lead to an increased tumor growth while specific knock down results in smaller tumors. Our data represent novel insights into the relevance of non-coding and circRNAs in colorectal cancer and provide a comprehensive resource of gene expression changes in primary tumors and metastases. In addition, we present candidate genes that could be important modulators for successful LDM chemotherapy.

Indexed as

circRNAcircZNF609colorectal cancerinterferon-induced genesLDM topotecan chemotherapyLINC00483lncRNAsmicropeptideMIR210HGmiRNA

Identifiers

PMID33375322
PMCPMC7795790
OpenAlexW3118234643

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.