Evidence map›Paper›PMID 33373099›Full record

ArticleMicrobiologyOpen2021

Effect of storage, temperature, and extraction kit on the phylogenetic composition detected in the human milk microbiota.

Katriona E Lyons, Fiona Fouhy, Carol-Anne O' Shea, C Anthony Ryan, Eugene M Dempsey, R Paul Ross, Catherine Stanton

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Katriona E LyonsTeagasc Food Research Centre, Moorepark, Fermoy, Co., Cork, Ireland.ORCID 0000-0003-0882-5405
Fiona FouhyTeagasc Food Research Centre, Moorepark, Fermoy, Co., Cork, Ireland.ORCID 0000-0002-8285-7694
Carol-Anne O' SheaAPC Microbiome Ireland, University College Cork, Cork, Ireland.ORCID 0000-0002-2336-6203
C Anthony RyanAPC Microbiome Ireland, University College Cork, Cork, Ireland.
Eugene M DempseyAPC Microbiome Ireland, University College Cork, Cork, Ireland.ORCID 0000-0002-6266-3462
R Paul RossAPC Microbiome Ireland, University College Cork, Cork, Ireland.ORCID 0000-0003-4876-8839
Catherine StantonTeagasc Food Research Centre, Moorepark, Fermoy, Co., Cork, Ireland.ORCID 0000-0002-6724-7011
University College Cork · IETeagasc - The Irish Agriculture and Food Development Authority · IE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human milk is considered the optimum feeding regime for newborns and is a source of bacteria for the developing infant gastrointestinal tract. However, as with all low biomass samples, standardization across variabilities such as sample collection, storage, and extraction methods is needed to eliminate discrepancies in microbial composition across studies. The aim of this study was to investigate how different storage methods, temperatures, preservatives, and extraction kits influence the human milk microbiome, compared to fresh samples. Breast milk samples were processed via six different methods: fresh (Method 1), frozen at -80°C (Method 2), treated with RNAlater and stored at 4°C or -80°C (Methods 3 and 4), and treated with Milk Preservation Solution at room temperature (Methods 5 and 6). Methods 1-5 were extracted using PowerFood

Indexed as

MicrobiotaSpecimen HandlingBacteriaFemaleFood PreservationFreezingHumansMilk, HumanTemperatureextraction kithuman milkmicrobiomestoragetemperature

Identifiers

PMID33373099
PMCPMC7841076
OpenAlexW3113614973

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.