Evidence map›Paper›PMID 33370288›Full record

ArticlePLoS neglected tropical diseases2020

A novel circulating tamiami mammarenavirus shows potential for zoonotic spillover.

Hector Moreno, Alberto Rastrojo, Rhys Pryce, Chiara Fedeli, Gert Zimmer, Thomas A Bowden, Gisa Gerold, Stefan Kunz

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.1field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 5 countries.

Hector MorenoInstitute of Microbiology, Lausanne University Hospital (IMUL-CHUV), Lausanne, Switzerland.ORCID 0000-0002-2615-8514
Alberto RastrojoDepartment of Virology and Microbiology, Centro de Biología Molecular Severo Ochoa (CBMSO-CSIC), Madrid, Spain.
Rhys PryceDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Roosevelt Drive, Oxford, United Kingdom.
Chiara FedeliInstitute of Microbiology, Lausanne University Hospital (IMUL-CHUV), Lausanne, Switzerland.
Gert ZimmerInstitute of Virology and Immunology (IVI), Mittelhäusern, Switzerland.
Thomas A BowdenDivision of Structural Biology, Wellcome Centre for Human Genetics, University of Oxford, Roosevelt Drive, Oxford, United Kingdom.
Gisa GeroldTWINCORE -Center for Experimental and Clinical Infection Research, Institute for Experimental Virology, Hannover, Germany.
Stefan KunzInstitute of Microbiology, Lausanne University Hospital (IMUL-CHUV), Lausanne, Switzerland.
University of Lausanne · CHCentre for Human Genetics · GBCentro de Biología Molecular Severo Ochoa · ESUniversity of Bern · CHUniversity of Veterinary Medicine Hannover, Foundation · DE

Funding

Medical Research Council MR/S007555/1Wellcome TrustWellcome Trust 203141/Z/16/Z
6 · The paper itself

Abstract

A detailed understanding of the mechanisms underlying the capacity of a virus to break the species barrier is crucial for pathogen surveillance and control. New World (NW) mammarenaviruses constitute a diverse group of rodent-borne pathogens that includes several causative agents of severe viral hemorrhagic fever in humans. The ability of the NW mammarenaviral attachment glycoprotein (GP) to utilize human transferrin receptor 1 (hTfR1) as a primary entry receptor plays a key role in dictating zoonotic potential. The recent isolation of Tacaribe and lymphocytic choriominingitis mammarenaviruses from host-seeking ticks provided evidence for the presence of mammarenaviruses in arthropods, which are established vectors for numerous other viral pathogens. Here, using next generation sequencing to search for other mammarenaviruses in ticks, we identified a novel replication-competent strain of the NW mammarenavirus Tamiami (TAMV-FL), which we found capable of utilizing hTfR1 to enter mammalian cells. During isolation through serial passaging in mammalian immunocompetent cells, the quasispecies of TAMV-FL acquired and enriched mutations leading to the amino acid changes N151K and D156N, within GP. Cell entry studies revealed that both substitutions, N151K and D156N, increased dependence of the virus on hTfR1 and binding to heparan sulfate proteoglycans. Moreover, we show that the substituted residues likely map to the sterically constrained trimeric axis of GP, and facilitate viral fusion at a lower pH, resulting in viral egress from later endosomal compartments. In summary, we identify and characterize a naturally occurring TAMV strain (TAMV-FL) within ticks that is able to utilize hTfR1. The TAMV-FL significantly diverged from previous TAMV isolates, demonstrating that TAMV quasispecies exhibit striking genetic plasticity that may facilitate zoonotic spillover and rapid adaptation to new hosts.

Indexed as

Amino Acid SequenceAnimalsAntigens, CDArenaviridaeArenaviridae InfectionsArenaviruses, New WorldCell LineChlorocebus aethiopsHEK293 CellsHumansInsect VectorsReceptors, TransferrinReceptors, VirusSequence AlignmentTicksVero CellsAntigens, CDCD71 antigenReceptors, TransferrinReceptors, VirusViral Envelope Proteins

Identifiers

PMID33370288
PMCPMC7794035
OpenAlexW3116567336

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.