Evidence map›Paper›PMID 33369710›Full record

ArticleAntonie van Leeuwenhoek2021

Archaeal communities of low and high microbial abundance sponges inhabiting the remote western Indian Ocean island of Mayotte.

Ana Rita Moura Polónia, Daniel Francis Richard Cleary, Anne Gauvin-Bialecki, Nicole Joy de Voogd

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In one paragraph

Article in Antonie van Leeuwenhoek, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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  9. Ammonia-oxidizing archaea in biological interactions.Journal of microbiology (Seoul, Korea) · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ana Rita Moura PolóniaLEMAM - Laboratory for Molecular Studies of Marine Environments, CESAM - Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, Campus Universitário de Santiago, 3810-193, Aveiro, Portugal. ritapolonia@ua.pt.ORCID http://orcid.org/0000-0003-3381-7677
Daniel Francis Richard ClearyLEMAM - Laboratory for Molecular Studies of Marine Environments, CESAM - Centre for Environmental and Marine Studies, Department of Biology, University of Aveiro, Campus Universitário de Santiago, 3810-193, Aveiro, Portugal.ORCID http://orcid.org/0000-0002-6143-3390
Anne Gauvin-BialeckiCHEMBIOPRO (Laboratoire de Chimie et de Biotechnologie des Produits Naturels), Saint-Denis, France.
Nicole Joy de VoogdNaturalis Biodiversity Center, Leiden, The Netherlands.ORCID http://orcid.org/0000-0002-7985-5604

Funding

ANR-Netbiome ANR-11-EBIM-0006European Social Fund SFRH/BPD/117563/2016Fundação para a Ciência e a Tecnologia PTDC/AAC-AMB/115304/2009Fundação para a Ciência e a Tecnologia SFRH/BPD/117563/2016Fundação para a Ciência e a Tecnologia UIDP/50017/2020+UIDB/50017/2020
6 · The paper itself

Abstract

Marine sponges are abundant and ecologically important components of coral reefs and have been shown to harbour exceptionally high microbial densities, which can differ substantially among sponge species. However, this dichotomy between high and low microbial abundance (HMA, LMA) sponges is still not fully understood, particularly as concerns the archaeal community. This study aims to fill this gap by analysing (using 454-pyrosequencing of the 16S rRNA gene) how the archaeal community varies among known LMA (Stylissa carteri, and Stylissa massa), known HMA (Hyrtios erectus and Xestospongia testudinaria) and unknown HMA/LMA status sponge species (Ectyoplasia coccinea, Paratetilla bacca and Petrosia aff. spheroida) collected in a remote location in which very few sponge microbial composition studies have been previously performed (Mayotte, Comores archipelago, France) and comparing the results with those reported in four other geographical areas. Based on archaeal community composition, the known LMA sponges formed a distinct cluster together with Paratetilla bacca, Ectyoplasia coccinea and seawater while the known HMA sponge X. testudinaria formed a cluster with Petrosia aff. spheroida. The known HMA sponge H. erectus, in turn, had an intermediate archaeal community between HMA sponges and sediment samples. In addition to the above, we also showed significant compositional congruence between archaeal and bacterial communities sampled from the same sponge individuals. HMA sponges were mainly dominated by members assigned to the genus Nitrosopumilus while LMA sponges were mainly dominated by members assigned to the genus Cenarchaeum. In general, there was no clear difference in richness between HMA and LMA sponges. Evenness, however, was higher in HMA than LMA sponges. Whilst the present study corroborates some of the traits commonly associated with the HMA-LMA dichotomy (higher evenness in Mayotte HMA sponges), this was not consistent across geographical areas showing that more research is needed to fully understand the HMA/LMA dichotomy as concerns Archaea.

Indexed as

ArchaeaPoriferaAnimalsBiodiversityComorosHumansPhylogenyRNA, Ribosomal, 16SSeawaterRNA, Ribosomal, 16SCenarchaeumCoral reefNitrosopumilusPyrosequencing

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.