Evidence map›Paper›PMID 33368035›Full record

ArticleDoklady. Biochemistry and biophysics2020

Variability and Phylogeny of the Pepper Phytoene Synthase Paralogs PSY1 and PSY2 in Species of Various Capsicum Complexes.

A V Shchennikova, E A Dyachenko, G I Efremov, M A Filyushin, E Z Kochieva

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Article in Doklady. Biochemistry and biophysics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

A V ShchennikovaInstitute of Bioengineering, Federal Research Center "Fundamentals of Biotechnology," Russian Academy of Sciences, Moscow, Russia.
E A DyachenkoInstitute of Bioengineering, Federal Research Center "Fundamentals of Biotechnology," Russian Academy of Sciences, Moscow, Russia.
G I EfremovInstitute of Bioengineering, Federal Research Center "Fundamentals of Biotechnology," Russian Academy of Sciences, Moscow, Russia.
M A FilyushinInstitute of Bioengineering, Federal Research Center "Fundamentals of Biotechnology," Russian Academy of Sciences, Moscow, Russia. michel7753@mail.ru.
E Z KochievaInstitute of Bioengineering, Federal Research Center "Fundamentals of Biotechnology," Russian Academy of Sciences, Moscow, Russia.
Federal Center Research Fundamentals of Biotechnology · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genes homologous to PSY1 and PSY2 that encode phytoene synthase isoforms in Capsicum species C. baccatum, C. chinense, C. frutescens, C. tovarii, C. eximium, and C. chacoense were identified. High conservatism of functionally significant sites of phytoene synthases of the analyzed accessions was revealed. It was found that only PSY1-based clustering of pepper species corresponds to the traditional Capsicum phylogeny; C. eximium was a part of the Purple corolla complex, and C. chacoense was equidistant from Annuum and Baccatum clades. The absence of significant differences between PSY1 and PSY2 of yellow-fruited C. chinense and red-fruited pepper accessions was shown. The yellow color of C. chinense fruit may be the result of both decreased PSY1 expression and increased PSY2 transcription. Thus, it was demonstrated that the acquired fruit pigmentation retains strict phylogenetic limitations, which, however, can be overcome using artificial selection for the activity of phytoene synthase PSY1.

Indexed as

Amino Acid SequenceCapsicumCarotenoidsCloning, MolecularFruitGeranylgeranyl-Diphosphate GeranylgeranyltransferaseIsoenzymesPhylogenyPigmentationPlant ProteinsSequence Homology(all-E) phytoeneCarotenoidsGeranylgeranyl-Diphosphate GeranylgeranyltransferaseIsoenzymesPlant ProteinsCapsicum speciescarotenogenesisevolution of the pepper fruit color

Identifiers

PMID33368035
OpenAlexW3115198670

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.