Evidence map›Paper›PMID 33368001›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2021

Progress Towards CryoEM: Negative-Stain Procedures for Biological Samples.

Shane Gonen

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.3field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Structural analysis of rhodopsin states in megabody complexes.Proceedings of the National Academy of Sciences of the United States of America · 2026
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  5. Enhanced suppression ofAntimicrobial agents and chemotherapy · 2025
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  6. Structural basis of inhibition of human NaNature communications · 2025
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  7. Structural basis of inhibition of human NabioRxiv : the preprint server for biology · 2024
    Article
  8. Enhanced Suppression ofbioRxiv : the preprint server for biology · 2024
    Article
  9. Article
  10. Cryo-electron microscopy-based drug design.Frontiers in molecular biosciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author at 1 institution in 1 country.

Shane GonenDepartment of Molecular Biology and Biochemistry, University of California Irvine, Irvine, CA, USA. gonens@uci.edu.
University of California, Irvine · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In recent years, electron cryo-microscopy (CryoEM) has become a powerful method for the high-resolution studies of biological macromolecules. While CryoEM experiments can begin without additional microscopy steps, negative-stain EM can tremendously minimize CryoEM screening. Negative-stain is a quick method that can be used to screen for robust biochemical conditions, the integrity, binding, and composition of samples and to get an estimation of sample grid concentration. For some applications, the map resolutions potentially afforded by stain may be as biologically informative as in CryoEM. Here, I describe the benefits and pitfalls of negative-stain EM, with particular emphasis on Uranyl stains with the main goal of screening in advance of CryoEM. In addition, I provide a materials list, detailed protocol and possible adjustments for the use of stains for biological samples requiring imaging and/or diffraction-based methods of EM.

Indexed as

Computer SystemsCryoelectron MicroscopyCrystallography, X-RayImage Processing, Computer-AssistedNegative StainingOrganometallic CompoundsSingle Molecule ImagingOrganometallic Compoundsuranyl acetateuranyl formateAveragingCryoEMCrystalsElectron crystallographyElectron microscopyNegative-stainSingle-particleUranyl acetateUranyl formate

Identifiers

PMID33368001
OpenAlexW3114232956

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.