Evidence map›Paper›PMID 33362851›Full record

ArticleFrontiers in genetics2020

Cardiac Regeneration and Tumor Growth-What Do They Have in Common?

Severin Dicks, Lonny Jürgensen, Florian Leuschner, David Hassel, Geoffroy Andrieux, Melanie Boerries

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 53% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Manipulating Myc for reparative regeneration.Frontiers in cell and developmental biology · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Severin DicksFaculty of Medicine, Institute of Medical Bioinformatics and Systems Medicine, Medical Center-University of Freiburg, Albert-Ludwigs-Universität, Freiburg, Germany.
Lonny JürgensenDepartment of Cardiology, Angiology and Pneumology, University of Heidelberg, Heidelberg, Germany.
Florian LeuschnerDepartment of Cardiology, Angiology and Pneumology, University of Heidelberg, Heidelberg, Germany.
David HasselDepartment of Cardiology, Angiology and Pneumology, University of Heidelberg, Heidelberg, Germany.
Geoffroy AndrieuxFaculty of Medicine, Institute of Medical Bioinformatics and Systems Medicine, Medical Center-University of Freiburg, Albert-Ludwigs-Universität, Freiburg, Germany.
Melanie BoerriesFaculty of Medicine, Institute of Medical Bioinformatics and Systems Medicine, Medical Center-University of Freiburg, Albert-Ludwigs-Universität, Freiburg, Germany.
Heidelberg University · DEUniversity of Freiburg · DEGerman Cancer Research Center · DEGerman Centre for Cardiovascular Research · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Acute myocardial infarction is a leading cause of death. Unlike most adult mammals, zebrafish have the capability to almost fully regenerate their hearts after injury. In contrast, ischemic damage in adult human and mouse hearts usually results in scar tissue. mRNA-Sequencing (Seq) and miRNA-Seq analyses of heart regeneration in zebrafish over time showed that the process can be divided into three phases: the first phase represents dedifferentiation and proliferation of cells, the second phase is characterized by migration, and in the third phase cell signals indicate heart development and differentiation. The first two phases seem to share major similarities with tumor development and growth. To gain more insight into these similarities between cardiac regeneration and tumor development and growth, we used patient matched tumor normal ("healthy") RNA-Seq data for several tumor entities from The Cancer Genome Atlas (TCGA). Subsequently, RNA data were processed using the same pipeline for both the zebrafish samples and tumor datasets. Functional analysis showed that multiple Gene Ontology terms (GO terms) are involved in both early stage cardiac regeneration and tumor development/growth across multiple tumor entities. These GO terms are mostly associated with cell cycle processes. Further analysis showed that orthologous genes are the same key players that regulated these changes in both diseases. We also observed that GO terms associated with heart development in the third late phase of cardiac regeneration are downregulated in the tumor entities. Taken together, our analysis illustrates similarities between cardiac remodeling and tumor progression.

Indexed as

heart regenerationmiRNA-sequencingmRNA-sequencingpan cancerzebrafish

Identifiers

PMID33362851
PMCPMC7756072
OpenAlexW3111736280

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.