Evidence map›Paper›PMID 33361293›Full record

ArticleAntimicrobial agents and chemotherapy2021

Replacement of S14 Protein in Ribosomes of Zinc-Starved Mycobacteria Reduces Spectinamide Sensitivity.

Yunlong Li, Ravi K Koripella, Manjuli R Sharma, Richard E Lee, Rajendra K Agrawal, Anil K Ojha

Open access · greenAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Journal of bacteriology · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yunlong LiDivision of Genetics, Wadsworth Center, New York State Department of Health, Albany, New York, USA.
Ravi K KoripellaDivision of Translational Medicine, Wadsworth Center, New York State Department of Health, Albany, New York, USA.
Manjuli R SharmaDivision of Translational Medicine, Wadsworth Center, New York State Department of Health, Albany, New York, USA.
Richard E LeeDepartment of Chemical Biology and Therapeutics, St. Jude Children's Research Hospital, Memphis, Tennessee, USA.
Rajendra K AgrawalDivision of Translational Medicine, Wadsworth Center, New York State Department of Health, Albany, New York, USA.
Anil K OjhaDivision of Genetics, Wadsworth Center, New York State Department of Health, Albany, New York, USA anil.ojha@health.ny.gov.ORCID 0000-0001-5940-2643
New York State Department of Health · USSt. Jude Children's Research Hospital · US

Funding

Development of Novel Proteins Synthesis Inhibitors for MDR TuberculosisR01AI090810 · NIAID · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI LEE, RICHARD E. · 2010 to 2022
$8.9M
Structural Aspects of Protein Synthesis in the Mammalian MitochondriaR01GM061576 · NIGMS · WADSWORTH CENTER · PI AGRAWAL, RAJENDRA K · 2001 to 2018
$6.4M
Alternative Ribosomes & Antibiotic Tolerance in MycobacteriaR01AI132422 · NIAID · WADSWORTH CENTER · PI RAJENDRA K AGRAWAL, Anil Kumar Ojha · 2017 to 2026
$3.8M
Physiology of Mycobacterium Tuberculosis with Hibernating RibosomesR21AI144474 · NIAID · WADSWORTH CENTER · PI OJHA, ANIL KUMAR · 2019 to 2020
$466k
NIAID NIH HHS R01 AI090810NIAID NIH HHS R01 AI132422NIAID NIH HHS R21 AI144474NIGMS NIH HHS R01 GM061576
6 · The paper itself

Abstract

Zinc is an essential micronutrient for mycobacteria, and its depletion induces multiple adaptive changes in cellular physiology, the most remarkable of which are remodeling and hibernation of ribosomes. Ribosome remodeling, induced upon relatively moderate depletion of zinc, involves replacement of multiple ribosomal proteins containing the zinc-binding CXXC motif (called C+ r proteins) by their motif-free C- paralogs. Severe zinc depletion induces binding of mycobacterial protein Y (Mpy) to the 70S C- ribosome, thereby stabilizing the ribosome in an inactive state that is also resistant to kanamycin and streptomycin. Because the Mpy binding region on the ribosome is proximal to the binding pocket of spectinamides (Spa), the preclinical drug candidates for tuberculosis, we addressed the impact of remodeling and hibernation of ribosomes on Spa sensitivity. We report here that while Mpy binding has no significant effect on Spa sensitivity to the ribosome, replacement of S14

Indexed as

Pharmaceutical PreparationsZincRibosomal ProteinsRibosomesRNA, Ribosomal, 16STranscription FactorsPharmaceutical PreparationsRibosomal ProteinsRNA, Ribosomal, 16STranscription FactorsZincantibiotic resistancemycobacterial persistenceribosome remodelingtuberculosiszinc starvation

Identifiers

PMID33361293
PMCPMC8092523
OpenAlexW3116911754

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.