Evidence map›Paper›PMID 33361269›Full record

ReviewMicrobiology and molecular biology reviews : MMBR2021

Andrew W L Rogers, Renée M Tsolis, Andreas J Bäumler

Open access · greenAbstract readReview
In one paragraph

Review in Microbiology and molecular biology reviews : MMBR, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 124 papers.

0numbers the graph read from it
0cells of the map it votes in
124citing papers in PubMed
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

124 citing papers in PubMed, 201 citations in OpenAlex.

  1. Review
  2. Gut microbes · 2026
    Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Exploring bet-hedging inmSystems · 2026
    Article
  8. Microbial Primer: Bacterial energy metabolism.Microbiology (Reading, England) · 2026
    Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Microorganisms · 2025
    Article
  14. Article
  15. Review
  16. Genomic evolution ofApplied and environmental microbiology · 2025
    Article
  17. Article
  18. Article
  19. Article
  20. Article

64 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Andrew W L RogersDepartment of Medical Microbiology and Immunology, School of Medicine, University of California at Davis, Davis, California, USA.
Renée M TsolisDepartment of Medical Microbiology and Immunology, School of Medicine, University of California at Davis, Davis, California, USA.ORCID 0000-0001-9131-6657
Andreas J BäumlerDepartment of Medical Microbiology and Immunology, School of Medicine, University of California at Davis, Davis, California, USA ajbaumler@ucdavis.edu.ORCID 0000-0001-9152-7809
University of California, Davis · US

Funding

Virulence Factors of SalmonellaR01AI044170 · NIAID · UNIVERSITY OF CALIFORNIA DAVIS · PI BAUMLER, ANDREAS J · 1999 to 2022
$8.5M
Microbiota Outgrowth by SalmonellaR01AI096528 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BAUMLER, ANDREAS J · 2011 to 2025
$6.1M
Mechanism of Colonization ResistanceR01AI112949 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Andreas J Baumler · 2016 to 2026
$5.2M
Innate immune sensing of ER stress during bacterial infectionR01AI109799 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI TSOLIS, RENEE M · 2014 to 2024
$3.6M
Animal Models of Infectious Diseases Training ProgramT32AI060555 · NIAID · UNIVERSITY OF CALIFORNIA DAVIS · PI MCSORLEY, STEPHEN J · 2004 to 2025
$3.3M
Neutrophil-intrinsic role of SLC11A1/NRAMP1 in control of bacterial infectionR01AI149632 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI TSOLIS, RENEE M · 2019 to 2023
$2.4M
Salmonella Host interactionsR37AI044170 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Andreas J Baumler, Renee M Tsolis · 2025 to 2026
$1.2M
Role of NRAMP1/SLC11A1 in Salmonella pathogenesisR21AI143253 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI TSOLIS, RENEE M · 2019 to 2020
$432k
Dietary copper reconfigures pathogen growthR21AI146432 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BAUMLER, ANDREAS J · 2019 to 2020
$432k
Citrobacter illuminates the mechanistic underpinnings of gut biogeographyR21AI153069 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BAUMLER, ANDREAS J · 2020 to 2021
$413k
Mechanism of E. coli colonization resistanceR56AI112949 · NIAID · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BAUMLER, ANDREAS J · 2014 to 2014
$382k
NIAID NIH HHS R01 AI044170NIAID NIH HHS R01 AI096528NIAID NIH HHS R01 AI109799NIAID NIH HHS R01 AI112949NIAID NIH HHS R01 AI149632NIAID NIH HHS R21 AI143253NIAID NIH HHS R21 AI146432NIAID NIH HHS R21 AI153069NIAID NIH HHS R37 AI044170NIAID NIH HHS R56 AI112949NIAID NIH HHS T32 AI060555
6 · The paper itself

Abstract

A balanced gut microbiota contributes to health, but the mechanisms maintaining homeostasis remain elusive. Microbiota assembly during infancy is governed by competition between species and by environmental factors, termed habitat filters, that determine the range of successful traits within the microbial community. These habitat filters include the diet, host-derived resources, and microbiota-derived metabolites, such as short-chain fatty acids. Once the microbiota has matured, competition and habitat filtering prevent engraftment of new microbes, thereby providing protection against opportunistic infections. Competition with endogenous

Indexed as

AnimalsDysbiosisFatty Acids, VolatileGastrointestinal MicrobiomeHumansIntestinal MucosaSalmonella Food PoisoningSalmonella typhimuriumVirulence FactorsFatty Acids, VolatileVirulence Factorscolonization resistancemicrobiomemicrobiotaSalmonella

Identifiers

PMID33361269
PMCPMC8549850
OpenAlexW3111605457

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.