Evidence map›Paper›PMID 33359463›Full record

ArticleBiophysical journal2021

Correlating the Structure and Activity of Y. pestis Ail in a Bacterial Cell Envelope.

James E Kent, Lynn M Fujimoto, Kyungsoo Shin, Chandan Singh, Yong Yao, Sang Ho Park, Stanley J Opella, Gregory V Plano, Francesca M Marassi

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Solid-state NMR of membrane proteins in situ.Current opinion in structural biology · 2025
    Review
  4. In situ NMR reveals a pH sensor motif in an outer membrane protein that drives bacterial vesicle production.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Interplays of mutations inFrontiers in cellular and infection microbiology · 2023
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

James E KentCancer Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, California.
Lynn M FujimotoCancer Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, California.
Kyungsoo ShinCancer Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, California.
Chandan SinghCancer Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, California.
Yong YaoCancer Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, California.
Sang Ho ParkDepartment Chemistry and Biochemistry, University of California, San Diego, La Jolla, California.
Stanley J OpellaDepartment Chemistry and Biochemistry, University of California, San Diego, La Jolla, California.
Gregory V PlanoDepartment of Microbiology and Immunology, University of Miami Miller School of Medicine, Miami, Florida.
Francesca M MarassiCancer Center, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, California. Electronic address: fmarassi@sbp.edu.
Sanford Burnham Prebys Medical Discovery Institute · USUniversity of California San Diego · USUniversity of Miami · US

Funding

Tumor Microenvironment and Cancer ImmunologyP30CA030199 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI ELENA B PASQUALE · 1985 to 2026
$107.2M
RESOURCE FOR SOLID STATE NMR OF PROTEINSP41EB002031 · NIBIB · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI OPELLA, STANLEY J · 2003 to 2018
$16.3M
Membrane Protein Effectors of Pathogen Interactions With HostR35GM118186 · NIGMS · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI Francesca M Marassi · 2016 to 2026
$8.5M
Structures, Dynamics, and Functions of Membrane ProteinsR35GM122501 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI OPELLA, STANLEY J · 2017 to 2021
$2.5M
Role of Yersinia pestis Ail-host ligand interactions in plagueR01AI130009 · NIAID · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI PLANO, GREGORY V · 2017 to 2021
$2.2M
CIHRNCI NIH HHS P30 CA030199NIAID NIH HHS R01 AI130009NIBIB NIH HHS P41 EB002031NIGMS NIH HHS R35 GM118186NIGMS NIH HHS R35 GM122501
6 · The paper itself

Abstract

Understanding microbe-host interactions at the molecular level is a major goal of fundamental biology and therapeutic drug development. Structural biology strives to capture biomolecular structures in action, but the samples are often highly simplified versions of the complex native environment. Here, we present an Escherichia coli model system that allows us to probe the structure and function of Ail, the major surface protein of the deadly pathogen Yersinia pestis. We show that cell surface expression of Ail produces Y. pestis virulence phenotypes in E. coli, including resistance to human serum, cosedimentation of human vitronectin, and pellicle formation. Moreover, isolated bacterial cell envelopes, encompassing inner and outer membranes, yield high-resolution solid-state NMR spectra that reflect the structure of Ail and reveal Ail sites that are sensitive to the bacterial membrane environment and involved in the interactions with human serum components. The data capture the structure and function of Ail in a bacterial outer membrane and set the stage for probing its interactions with the complex milieu of immune response proteins present in human serum.

Indexed as

Yersinia pestisBacterial Outer Membrane ProteinsEscherichia coliHumansVirulenceVirulence FactorsBacterial Outer Membrane ProteinsVirulence Factors

Identifiers

PMID33359463
PMCPMC7895992
OpenAlexW3116108534

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.