Evidence map›Paper›PMID 33359294›Full record

ArticleActa biomaterialia2021

Fluctuating nonlinear spring theory: Strength, deformability, and toughness of biological nanoparticles from theoretical reconstruction of force-deformation spectra.

Farkhad Maksudov, Olga Kononova, Aida Llauró, Alvaro Ortega-Esteban, Trevor Douglas, Gabriela N Condezo, Carmen San Martín, Kenneth A Marx, Gijs J L Wuite, Wouter H Roos and 2 more

Abstract read
In one paragraph

Article in Acta biomaterialia, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

12 authors.

Farkhad MaksudovDepartment of Chemistry, University of Massachusetts, Lowell, MA 01854, United States.
Olga KononovaDepartment of Chemistry, University of Massachusetts, Lowell, MA 01854, United States.
Aida LlauróDepartment of Condensed Matter Physics and Condensed Matter Physics Center, Universidad Autónoma de Madrid, 28049, Madrid, Spain.
Alvaro Ortega-EstebanDepartment of Condensed Matter Physics and Condensed Matter Physics Center, Universidad Autónoma de Madrid, 28049, Madrid, Spain.
Trevor DouglasDepartment of Chemistry, Indiana University, Bloomington, IN 47405, United States.
Gabriela N CondezoDepartment of Macromolecular Structures and NanoBioMedicine Initiative, Centro Nacional de Biotecnología (CNB-CIC), Darwin 3, 28049 Madrid, Spain.
Carmen San MartínDepartment of Macromolecular Structures and NanoBioMedicine Initiative, Centro Nacional de Biotecnología (CNB-CIC), Darwin 3, 28049 Madrid, Spain.
Kenneth A MarxDepartment of Chemistry, University of Massachusetts, Lowell, MA 01854, United States.
Gijs J L WuiteDepartment of Physics and Astronomy, and LaserLaB Amsterdam, Vrije Universiteit Amsterdam, De Boelelaan 1081, 1081 HV, Amsterdam, The Netherlands.
Wouter H RoosMoleculaire Biofysica, Zernike Instituut, Rijksuniversiteit Groningen, 9747 AG Groningen, The Netherlands.
Pedro J de PabloDepartment of Condensed Matter Physics and Condensed Matter Physics Center, Universidad Autónoma de Madrid, 28049, Madrid, Spain. Electronic address: p.j.depablo@uam.es.
Valeri BarsegovDepartment of Chemistry, University of Massachusetts, Lowell, MA 01854, United States. Electronic address: valeri_barsegov@uml.edu.

Funding

Mechanisms of mechano-chemical rupture of blood clots and thrombiR01HL148227 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI PUROHIT, PRASHANT KISHORE · 2020 to 2023
$2.5M
NHLBI NIH HHS R01 HL148227
6 · The paper itself

Abstract

We developed the Fluctuating Nonlinear Spring (FNS) model to describe the dynamics of mechanical deformation of biological particles, such as virus capsids. The theory interprets the force-deformation spectra in terms of the "Hertzian stiffness" (non-linear regime of a particle's small-amplitude deformations), elastic constant (large-amplitude elastic deformations), and force range in which the particle's fracture occurs. The FNS theory enables one to quantify the particles' elasticity (Young's moduli for Hertzian and bending deformations), and the limits of their strength (critical forces, fracture toughness) and deformability (critical deformations) as well as the probability distributions of these properties, and to calculate the free energy changes for the particle's Hertzian, elastic, and plastic deformations, and eventual fracture. We applied the FNS theory to describe the protein capsids of bacteriophage P22, Human Adenovirus, and Herpes Simplex virus characterized by deformations before fracture that did not exceed 10-19% of their size. These nanoshells are soft (~1-10-GPa elastic modulus), with low ~50-480-kPa toughness - a regime of material behavior that is not well understood, and with the strength increasing while toughness decreases with their size. The particles' fracture is stochastic, with the average values of critical forces, critical deformations, and fracture toughness comparable with their standard deviations. The FNS theory predicts 0.7-MJ/mol free energy for P22 capsid maturation, and it could be extended to describe uniaxial deformation of cylindrical microtubules and ellipsoidal cellular organelles.

Indexed as

Mechanical PhenomenaNanoparticlesElasticityElastic ModulusHumansNonlinear DynamicsFluctuating nonlinear spring (FNS) modelForce-deformation spectraFracture toughnessProbability distribution of critical deformationsProbability distribution of critical forces

Identifiers

PMID33359294
PMCPMC7897321

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.