Evidence map›Paper›PMID 33358997›Full record

ArticleJournal of immunological methods2021

Multiplex bead binding assays using off-the-shelf components and common flow cytometers.

Takamitsu Hattori, Akiko Koide, Tatyana Panchenko, Larizbeth A Romero, Kai Wen Teng, Alexis D Corrado, Shohei Koide

Abstract read
In one paragraph

Article in Journal of immunological methods, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Article
  3. Engineering antibody-drug conjugates targeting an adhesion GPCR, CD97.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Engineering Binders with Exceptional Selectivity.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Takamitsu HattoriPerlmutter Cancer Center, New York University Langone Health, New York, NY 10016, USA; Department of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY 10016, USA.
Akiko KoidePerlmutter Cancer Center, New York University Langone Health, New York, NY 10016, USA; Department of Medicine, New York University School of Medicine, New York, NY 10016, USA.
Tatyana PanchenkoPerlmutter Cancer Center, New York University Langone Health, New York, NY 10016, USA.
Larizbeth A RomeroDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY 10016, USA.
Kai Wen TengPerlmutter Cancer Center, New York University Langone Health, New York, NY 10016, USA.
Alexis D CorradoPerlmutter Cancer Center, New York University Langone Health, New York, NY 10016, USA.
Shohei KoidePerlmutter Cancer Center, New York University Langone Health, New York, NY 10016, USA; Department of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY 10016, USA. Electronic address: Shohei.Koide@nyulangone.org.

Funding

Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ANIRBAN MAITRA · 1985 to 2026
$83.1M
Probing RAS-mediated Signaling with Monobody InhibitorsR01CA212608 · NCI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI SHOHEI KOIDE, John P O'Bryan · 2017 to 2026
$5.8M
Molecular mechanisms of SHP2 signaling dissected with designer binding proteinsR01CA194864 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KOIDE, SHOHEI · 2016 to 2020
$1.8M
Rational generation of high-performance recombinant antibodies to post-translational modificationsR21CA246457 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI HATTORI, TAKAMITSU · 2020 to 2020
$620k
Accurate prediction of neutralization capacity from deep mining of SARS-CoV-2 serologyR21AI158997 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KOIDE, SHOHEI · 2020 to 2020
$466k
NCI NIH HHS P30 CA016087NCI NIH HHS R01 CA194864NCI NIH HHS R01 CA212608NCI NIH HHS R21 CA246457NIAID NIH HHS R21 AI158997
6 · The paper itself

Abstract

The ability to quantify protein-ligand interactions in an accurate and high-throughput manner is important in diverse areas of biology and medicine. Multiplex bead binding assays (MBBAs) are powerful methods that allow for simultaneous analysis of many protein-ligand interactions. Although there are a number of well-established MBBA platforms, there are few platforms suitable for research and development that offer rapid experimentation at low costs and without the need for specialized reagents or instruments dedicated for MBBA. Here, we describe a MBBA method that uses low-cost reagents and standard cytometers. The key innovation is the use of the essentially irreversible biotin-streptavidin interaction. We prepared a biotin-conjugated fluorescent dye and used it to produce streptavidin-coated magnetic beads that are labeled at distinct levels of fluorescence. We show the utility of our method in characterization of phage-displayed antibodies against multiple antigens of SARS-CoV-2, which substantially improves the throughput and dramatically reduces antigen consumption compared with conventional phage ELISA methods. This approach will make MBBAs more broadly accessible.

Indexed as

Bacterial ProteinsBiotinCell Surface Display TechniquesCOVID-19COVID-19 Serological TestingFlow CytometryFluorescent DyesHEK293 CellsHigh-Throughput Screening AssaysHumansImmunomagnetic SeparationMicrospheresMutationProtein BindingSARS-CoV-2Spike Glycoprotein, CoronavirusBacterial ProteinsBiotinbiotin-streptavidin complexFluorescent DyesSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2Affinity determinationAntibody-antigen interactionAntibody screeningMultiplex assayPhage display

Identifiers

PMID33358997
PMCPMC7867647

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.