Evidence map›Paper›PMID 33356812›Full record

ArticleEpigenetics2021

Upregulation of polycistronic microRNA-143 and microRNA-145 in colonocytes suppresses colitis and inflammation-associated colon cancer.

Urszula Dougherty, Reba Mustafi, Hongyan Zhu, Xiaorong Zhu, Dilip Deb, Stephen C Meredith, Fatma Ayaloglu-Butun, Michelle Fletcher, Arantxa Sanchez, Joel Pekow and 15 more

Open access · bronzeAbstract read
In one paragraph

Article in Epigenetics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Review
  6. Review
  7. Article
  8. Dysregulation of miR-1-3p: An Early Event in Colitis-Associated Dysplasia.International journal of molecular sciences · 2022
    Article
  9. MicroRNAs in Inflammatory Bowel Disease and Its Complications.International journal of molecular sciences · 2022
    Review
  10. Review
  11. Review
  12. Article
  13. Exploration of the Effect on Genome-Wide DNA Methylation byInternational journal of molecular sciences · 2021
    Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 3 institutions in 1 country.

Urszula DoughertyDepartment of Medicine, University of Chicago, Chicago IL, USA.
Reba MustafiDepartment of Medicine, University of Chicago, Chicago IL, USA.
Hongyan ZhuDepartment of Medicine, University of Chicago, Chicago IL, USA.
Xiaorong ZhuDepartment of Medicine, University of Chicago, Chicago IL, USA.
Dilip DebDepartment of Medicine, University of Chicago, Chicago IL, USA.
Stephen C MeredithDepartments of Pathology, University of Chicago, Chicago IL, USA.
Fatma Ayaloglu-ButunDepartment of Medicine, University of Chicago, Chicago IL, USA.
Michelle FletcherDepartment of Medicine, University of Chicago, Chicago IL, USA.
Arantxa SanchezDepartment of Medicine, University of Chicago, Chicago IL, USA.
Joel PekowDepartment of Medicine, University of Chicago, Chicago IL, USA.
Zifeng DengDepartment of Medicine, University of Chicago, Chicago IL, USA.
Nader AminiDepartment of Medicine, University of Chicago, Chicago IL, USA.
Vani J KondaDepartment of Medicine, Baylor University, Dallas, TX, USA.ORCID 0000-0002-9932-8780
Vijaya L RaoDepartment of Medicine, University of Chicago, Chicago IL, USA.
Atsushi SakurabaDepartment of Medicine, University of Chicago, Chicago IL, USA.
Akushika KwesiDepartment of Medicine, University of Chicago, Chicago IL, USA.
Sonia S KupferDepartment of Medicine, University of Chicago, Chicago IL, USA.
Alessandro FicheraDepartment of Surgery, Baylor University, Dallas, TX, USA.
Loren JosephDepartments of Pathology, Beth Israel, Harvard Medical School, Boston, MA, USA.
John HartDepartments of Pathology, University of Chicago, Chicago IL, USA.
Fang HeDepartments of Orthopedics, The University of Chicago, Chicago, IL, USA.
Tong-Chuan HeDepartments of Orthopedics, The University of Chicago, Chicago, IL, USA.
Diana West-SzymanskiDepartment of Medicine, University of Chicago, Chicago IL, USA.ORCID 0000-0002-2933-1159
Yan Chun LiDepartment of Medicine, University of Chicago, Chicago IL, USA.
Marc BissonnetteDepartment of Medicine, University of Chicago, Chicago IL, USA.ORCID 0000-0001-8420-4294
University of Chicago · USBaylor University · USHarvard University · US

Funding

VIRAL ONCOLOGY CORE FACILITYP30CA014599 · NCI · UNIVERSITY OF CHICAGO · PI CHIEN-MIN KAO · 1985 to 2026
$122.1M
ULTRASTRUCTURE AND CYTOMORPHOLOGY COREP30DK042086 · NIDDK · UNIVERSITY OF CHICAGO · PI CHANG, EUGENE B · 1990 to 2025
$29.8M
FITting noninvasive testing into Lynch syndrome colorectal cancer surveillance: a multicenter, prospective trialR01CA287257 · NCI · UNIVERSITY OF CHICAGO · PI Fay Kastrinos, Sonia Kupfer · 2024 to 2026
$3.4M
Development of 5hmC and 5mC biomarkers in cell-free circulating DNA for sensitive colon cancer detection and prognosisU01CA217078 · NCI · UNIVERSITY OF CHICAGO · PI BISSONNETTE, BRUCE MARC, ZHANG, WEI · 2017 to 2021
$3.2M
Colonic responses to vitamin D and aspirin in African- and European-AmericansR01CA220329 · NCI · UNIVERSITY OF CHICAGO · PI KUPFER, SONIA · 2018 to 2022
$1.9M
(PQA1) Mechanism of Vitamin D Chemoprevention Against Colon CancerR01CA180087 · NCI · UNIVERSITY OF CHICAGO · PI LI, YAN CHUN · 2013 to 2016
$1.7M
Roles of EGFR and miR-143/miR-145 in Western diet-promoted colonic tumorigenesisR01CA164124 · NCI · UNIVERSITY OF CHICAGO · PI BISSONNETTE, BRUCE MARC · 2012 to 2016
$1.6M
A genomewide discovery of chemoresistance-associated noncoding RNAs in human cancersR21CA226303 · NCI · UNIVERSITY OF CHICAGO · PI HE, TONG-CHUAN · 2018 to 2019
$381k
NCI NIH HHS P30 CA014599NCI NIH HHS R01 CA164124NCI NIH HHS R01 CA180087NCI NIH HHS R01 CA220329NCI NIH HHS R01 CA287257NCI NIH HHS R21 CA226303NCI NIH HHS U01 CA217078NIDDK NIH HHS P30 DK042086
6 · The paper itself

Abstract

Because ADAM17 promotes colonic tumorigenesis, we investigated potential miRNAs regulating ADAM17; and examined effects of diet and tumorigenesis on these miRNAs. We also examined pre-miRNA processing and tumour suppressor roles of several of these miRNAs in experimental colon cancer. Using TargetScan, miR-145, miR-148a, and miR-152 were predicted to regulate ADAM17. miR-143 was also investigated as miR-143 and miR-145 are co-transcribed and associated with decreased tumour growth. HCT116 colon cancer cells (CCC) were co-transfected with predicted ADAM17-regulating miRNAs and luciferase reporters controlled by ADAM17-3'UTR. Separately, pre-miR-143 processing by colonic cells was measured. miRNAs were quantified by RT-PCR. Tumours were induced with AOM/DSS in WT and transgenic mice (Tg) expressing pre-miR-143/miR-145 under villin promoter. HCT116 transfection with miR-145, -148a or -152, but not scrambled miRNA inhibited ADAM17 expression and luciferase activity. The latter was suppressed by mutations in ADAM17-3'UTR. Lysates from colonocytes, but not CCC, processed pre-miR-143 and mixing experiments suggested CCC lacked a competency factor. Colonic miR-143, miR-145, miR-148a, and miR-152 were downregulated in tumours and more moderately by feeding mice a Western diet. Tg mice were resistant to DSS colitis and had significantly lower cancer incidence and tumour multiplicity. Tg expression blocked up-regulation of putative targets of miR-143 and miR-145, including ADAM17, K-Ras, XPO5, and SET. miR-145, miR-148a, and miR-152 directly suppress colonocyte ADAM17 and are down-regulated in colon cancer. This is the first direct demonstration of tumour suppressor roles for miR-143 and miR-145 in an

Indexed as

ColitisColonic NeoplasmsMicroRNAsAnimalsDNA MethylationDown-RegulationGene Expression Regulation, NeoplasticHumansInflammationKaryopherinsMiceUp-RegulationKaryopherinsMicroRNAsMIRN143 microRNA, humanMIRN143 microRNA, mouseMIRN145a microRNA, mouseMIRN145 microRNA, humanMIRN152 microRNA, humanXPO5 protein, humanazoxymethanecolon cancerDSS colitismiR-143/miR-145

Identifiers

PMID33356812
PMCPMC8813074
OpenAlexW3116874627

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.