Evidence map›Paper›PMID 33355655›Full record

ArticleMolecular biology and evolution2021

Acoel Single-Cell Transcriptomics: Cell Type Analysis of a Deep Branching Bilaterian.

Jules Duruz, Cyrielle Kaltenrieder, Peter Ladurner, Rémy Bruggmann, Pedro Martìnez, Simon G Sprecher

Abstract read
In one paragraph

Article in Molecular biology and evolution, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Review
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  11. Functional genomics in Spiralia.Briefings in functional genomics · 2023
    Article
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  14. Review
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

6 authors.

Jules DuruzDepartment of Biology, Institute of Zoology, University of Fribourg, Fribourg, Switzerland.
Cyrielle KaltenriederDepartment of Biology, Institute of Zoology, University of Fribourg, Fribourg, Switzerland.
Peter LadurnerInstitute of Zoology and Center of Molecular Bioscience Innsbruck, University of Innsbruck, Innsbruck, Austria.
Rémy BruggmannInstitute of Cell Biology, University of Bern, Bern, Switzerland.
Pedro MartìnezDepartament de Genètica, Universitat de Barcelona, Barcelona, Catalonia, Spain.
Simon G SprecherDepartment of Biology, Institute of Zoology, University of Fribourg, Fribourg, Switzerland.

Funding

Austrian Science Fund FWF P 30347
6 · The paper itself

Abstract

Bilaterian animals display a wide variety of cell types, organized into defined anatomical structures and organ systems, which are mostly absent in prebilaterian animals. Xenacoelomorpha are an early-branching bilaterian phylum displaying an apparently relatively simple anatomical organization that have greatly diverged from other bilaterian clades. In this study, we use whole-body single-cell transcriptomics on the acoel Isodiametra pulchra to identify and characterize different cell types. Our analysis identifies the existence of ten major cell type categories in acoels all contributing to main biological functions of the organism: metabolism, locomotion and movements, behavior, defense, and development. Interestingly, although most cell clusters express core fate markers shared with other animal clades, we also describe a surprisingly large number of clade-specific marker genes, suggesting the emergence of clade-specific common molecular machineries functioning in distinct cell types. Together, these results provide novel insight into the evolution of bilaterian cell types and open the door to a better understanding of the origins of the bilaterian body plan and their constitutive cell types.

Indexed as

TranscriptomeAnimalsPhylogenySingle-Cell AnalysisTurbellariabilaterianssingle-cell transcriptomicsXenacoelomorpha

Identifiers

PMID33355655
PMCPMC8097308

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.