Evidence map›Paper›PMID 33355530›Full record

ArticleMicrobial genomics2021

Comparative genomics revealed adaptive admixture in

Swapnil Tichkule, Aaron R Jex, Cock van Oosterhout, Anna Rosa Sannella, Ralf Krumkamp, Cassandra Aldrich, Oumou Maiga-Ascofare, Denise Dekker, Maike Lamshöft, Joyce Mbwana and 21 more

Open access · goldAbstract read
In one paragraph

Article in Microbial genomics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Advancing genomics for waterborne pathogen surveillance in Australia.The Lancet regional health. Western Pacific · 2026
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Phylogenomic reconstruction ofbioRxiv : the preprint server for biology · 2024
    Article
  10. Article
  11. Current tropical medicine reports · 2024
    Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Challenges forGenes · 2021
    Review
  18. Frontiers in genetics · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

31 authors at 10 institutions in 9 countries.

Swapnil TichkulePopulation Health and Immunity, Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.
Aaron R JexPopulation Health and Immunity, Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.
Cock van OosterhoutSchool of Environmental Sciences, University of East Anglia, Norwich Research Park, Norwich, UK.
Anna Rosa SannellaDepartment of Infectious Disease, Istituto Superiore di Sanità, Viale Regina Elena 299, 00161, Rome, Italy.
Ralf KrumkampDepartment of Infectious Disease Epidemiology, Bernhard Nocht Institute for Tropical Medicine Hamburg, Bernhard-Nocht-Strasse 74, 20359 Hamburg, Germany.
Cassandra AldrichDepartment of Infectious Disease Epidemiology, Bernhard Nocht Institute for Tropical Medicine Hamburg, Bernhard-Nocht-Strasse 74, 20359 Hamburg, Germany.
Oumou Maiga-AscofareKumasi Centre for Collaborative Research in Tropical Medicine, College of Health Sciences, KNUST, Kumasi, Ghana.
Denise DekkerDepartment of Infectious Disease Epidemiology, Bernhard Nocht Institute for Tropical Medicine Hamburg, Bernhard-Nocht-Strasse 74, 20359 Hamburg, Germany.
Maike LamshöftDepartment of Infectious Disease Epidemiology, Bernhard Nocht Institute for Tropical Medicine Hamburg, Bernhard-Nocht-Strasse 74, 20359 Hamburg, Germany.
Joyce MbwanaNational Institute for Medical Research, Tanga Research Centre, Tanga, Tanzania.
Njari RakotozandrindrainyUniversity of Antananarivo, BP 566, Antananarivo 101, Madagascar.
Steffen BorrmannCentre de Recherches Médicales de Lambaréné, BP 242 Lambaréné, Gabon.
Thorsten ThyeDepartment of Infectious Disease Epidemiology, Bernhard Nocht Institute for Tropical Medicine Hamburg, Bernhard-Nocht-Strasse 74, 20359 Hamburg, Germany.
Kathrin SchuldtDepartment of Infectious Disease Epidemiology, Bernhard Nocht Institute for Tropical Medicine Hamburg, Bernhard-Nocht-Strasse 74, 20359 Hamburg, Germany.
Doris WinterDepartment of Infectious Disease Epidemiology, Bernhard Nocht Institute for Tropical Medicine Hamburg, Bernhard-Nocht-Strasse 74, 20359 Hamburg, Germany.
Peter G KremsnerCentre de Recherches Médicales de Lambaréné, BP 242 Lambaréné, Gabon.
Kwabena OppongKumasi Centre for Collaborative Research in Tropical Medicine, College of Health Sciences, KNUST, Kumasi, Ghana.
Prince ManouanaCentre de Recherches Médicales de Lambaréné, BP 242 Lambaréné, Gabon.
Mirabeau MbongCentre de Recherches Médicales de Lambaréné, BP 242 Lambaréné, Gabon.
Samwel GesaseNational Institute for Medical Research, Tanga Research Centre, Tanga, Tanzania.
Daniel T R MinjaNational Institute for Medical Research, Tanga Research Centre, Tanga, Tanzania.
Ivo MuellerPopulation Health and Immunity, Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.
Melanie BahloPopulation Health and Immunity, Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, Australia.
Johanna NaderDepartment of Genetics and Bioinformatics, Division of Health Data and Digitalisation, Norwegian Institute of Public Health, Oslo, Norway.
Jürgen MayDepartment of Infectious Disease Epidemiology, Bernhard Nocht Institute for Tropical Medicine Hamburg, Bernhard-Nocht-Strasse 74, 20359 Hamburg, Germany.
Raphael RakotozandrindrainUniversity of Antananarivo, BP 566, Antananarivo 101, Madagascar.
Ayola Akim AdegnikaCentre de Recherches Médicales de Lambaréné, BP 242 Lambaréné, Gabon.
John P A LusinguNational Institute for Medical Research, Tanga Research Centre, Tanga, Tanzania.
John AmuasiKumasi Centre for Collaborative Research in Tropical Medicine, College of Health Sciences, KNUST, Kumasi, Ghana.
Daniel EibachDepartment of Infectious Disease Epidemiology, Bernhard Nocht Institute for Tropical Medicine Hamburg, Bernhard-Nocht-Strasse 74, 20359 Hamburg, Germany.
Simone Mario CaccioDepartment of Infectious Disease, Istituto Superiore di Sanità, Viale Regina Elena 299, 00161, Rome, Italy.
German Center for Infection Research · DECentre de Recherche Médicales de Lambaréné · GANational Institute for Medical Research · TZThe University of Melbourne · AUKwame Nkrumah University of Science and Technology · GHIstituto Superiore di Sanità · ITUniversity of Antananarivo · MGLMU Klinikum · DENorwegian Institute of Public Health · NOUniversity of East Anglia · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cryptosporidiosis is a major cause of diarrhoeal illness among African children, and is associated with childhood mortality, malnutrition, cognitive development and growth retardation.

Indexed as

Polymorphism, Single NucleotideAdaptation, PhysiologicalCryptosporidiumGabonGenetic IntrogressionGenome, ProtozoanGenomicsGhanaHigh-Throughput Nucleotide SequencingMadagascarPhylogenyRural PopulationTanzaniaWhole Genome SequencingAfricaCryptosporidium hominisgenetic introgressionpopulation structurerecombinationwhole-genome sequencing

Identifiers

PMID33355530
PMCPMC8115899
OpenAlexW3117614108

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.