Evidence map›Paper›PMID 33355311›Full record

ArticleGenome research2021

Profiling neural editomes reveals a molecular mechanism to regulate RNA editing during development.

Suba Rajendren, Alfa Dhakal, Pranathi Vadlamani, Jack Townsend, Sarah N Deffit, Heather A Hundley

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 60 citations in OpenAlex.

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  5. ADARs mediate distinct RNA editing activity and gene regulation in thebioRxiv : the preprint server for biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Suba RajendrenDepartment of Biology, Indiana University, Bloomington, Indiana 47405, USA.
Alfa DhakalMedical Sciences Program, Indiana University School of Medicine-Bloomington, Bloomington, Indiana 47405, USA.
Pranathi VadlamaniMedical Sciences Program, Indiana University School of Medicine-Bloomington, Bloomington, Indiana 47405, USA.
Jack TownsendMedical Sciences Program, Indiana University School of Medicine-Bloomington, Bloomington, Indiana 47405, USA.
Sarah N DeffitMedical Sciences Program, Indiana University School of Medicine-Bloomington, Bloomington, Indiana 47405, USA.
Heather A HundleyMedical Sciences Program, Indiana University School of Medicine-Bloomington, Bloomington, Indiana 47405, USA.ORCID 0000-0002-9106-9016
Indiana University Bloomington · US

Funding

Quality Assurance and Quality Control Project Management: Improving Submissions and Study Conduct in the Human Subjects Research Prior Approval ProcessUL1TR002529 · NCATS · INDIANA UNIVERSITY INDIANAPOLIS · PI MOE, SHARON M, WIEHE, SARAH ELIZABETH · 2018 to 2022
$27.2M
Molecular mechanisms that regulate ADAR target recognition and RNA editing in vivoR01GM130759 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI HUNDLEY, HEATHER ANN · 2019 to 2023
$1.8M
Regulation of A-to-I editing in NeuronsF32GM119257 · NIGMS · INDIANA UNIVERSITY INDIANAPOLIS · PI DEFFIT, SARAH N · 2017 to 2017
$42k
NCATS NIH HHS UL1 TR002529NIGMS NIH HHS F32 GM119257NIGMS NIH HHS R01 GM130759
6 · The paper itself

Abstract

Adenosine (A) to inosine (I) RNA editing contributes to transcript diversity and modulates gene expression in a dynamic, cell type-specific manner. During mammalian brain development, editing of specific adenosines increases, whereas the expression of A-to-I editing enzymes remains unchanged, suggesting molecular mechanisms that mediate spatiotemporal regulation of RNA editing exist. Herein, by using a combination of biochemical and genomic approaches, we uncover a molecular mechanism that regulates RNA editing in a neural- and development-specific manner. Comparing editomes during development led to the identification of neural transcripts that were edited only in one life stage. The stage-specific editing is largely regulated by differential gene expression during neural development. Proper expression of nearly one-third of the neurodevelopmentally regulated genes is dependent on

Indexed as

RNA EditingAdenosineAdenosine DeaminaseAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsInosineAdenosineAdenosine DeaminaseAdr-1 protein, C elegansAdr-2 protein, C elegansCaenorhabditis elegans ProteinsInosine

Identifiers

PMID33355311
PMCPMC7849389
OpenAlexW3114870859

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.