Evidence map›Paper›PMID 33354722›Full record

SynthesisInternational journal of epidemiology2021

Epigenome-wide association study of diet quality in the Women's Health Initiative and TwinsUK cohort.

Whitney L Do, Eric A Whitsel, Ricardo Costeira, Olatz M Masachs, Caroline I Le Roy, Jordana T Bell, Lisa R Staimez, Aryeh D Stein, Alicia K Smith, Steve Horvath and 10 more

Open access · bronzeAbstract readMeta-Analysis
In one paragraph

Synthesis in International journal of epidemiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 2 pooled it
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 2 syntheses or guidelines pooled it, 29 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Diet Quality and Epigenetic Aging in the Women's Health Initiative.Journal of the Academy of Nutrition and Dietetics · 2024
    Article
  9. Article
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  12. Review
  13. Article
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  18. Article
  19. A biosocial return to race? A cautionary view for the postgenomic era.American journal of human biology : the official journal of the Human Biology Council · 2022
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 10 institutions in 2 countries.

Whitney L DoHubert Department of Global Health, Rollins School of Public Health, Emory University, Atlanta, GA, USA.ORCID 0000-0001-8977-9951
Eric A WhitselDepartments of Epidemiology and Medicine, University of North Carolina, Chapel Hill, NC, USA.
Ricardo CosteiraDepartment of Twin Research and Genetic Epidemiology, King's College London, London SE1 7EH, UK.
Olatz M MasachsDepartment of Twin Research and Genetic Epidemiology, King's College London, London SE1 7EH, UK.
Caroline I Le RoyDepartment of Twin Research and Genetic Epidemiology, King's College London, London SE1 7EH, UK.
Jordana T BellDepartment of Twin Research and Genetic Epidemiology, King's College London, London SE1 7EH, UK.
Lisa R StaimezHubert Department of Global Health, Rollins School of Public Health, Emory University, Atlanta, GA, USA.
Aryeh D SteinHubert Department of Global Health, Rollins School of Public Health, Emory University, Atlanta, GA, USA.
Alicia K SmithDepartment of Gynecology and Obstetrics, School of Medicine, Emory University, Atlanta, GA, USA.
Steve HorvathDepartment of Human Genetics, University of California, Los Angeles, CA, USA.
Themistocles L AssimesDepartment of Medicine, Stanford University, Palo Alto, CA, USA.
Simin LiuDepartment of Epidemiology, School of Public Health, Brown University, Providence, RI, USA.
JoAnn E MansonDepartment of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Aladdin H ShadyabDepartment of Family Medicine and Public Health, University of California San Diego School of Medicine, La Jolla, CA, USA.
Yun LiDepartment of Genetics, University of North Carolina, Chapel Hill, NC, USA.
Lifang HouDepartment of Preventive Medicine, Feinberg School of Medicine, Northwestern University, Chicago, IL, USA.
Parveen BhattiCancer Control Research, BC Cancer, Vancouver, BC, Canada.ORCID 0000-0003-1709-1781
Kristina JordahlProgram in Epidemiology, Division of Public Health Sciences, Fred Hutchinson Cancer Research Center, Seattle, WA, USA.
K M Venkat NarayanHubert Department of Global Health, Rollins School of Public Health, Emory University, Atlanta, GA, USA.
Karen N ConneelyDepartment of Human Genetics, School of Medicine, Emory University, Atlanta, GA, USA.
Emory University · USKing's College London · GBFred Hutch Cancer Center · USUniversity of North Carolina at Chapel Hill · USBrigham and Women's Hospital · USBrown University · USNorthwestern University · USStanford University · USUniversity of California, Los Angeles · USUniversity of California San Diego · US

Funding

Implementing a Maternal health and PRegnancy Outcomes Vision for Everyone (IMPROVE)UL1TR002378 · NCATS · EMORY UNIVERSITY · PI Andres J Garcia, Elizabeth O. Ofili · 2017 to 2026
$92.1M
UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Stephanie Engel · 2001 to 2026
$36.3M
Institutional Career Development CoreKL2TR002381 · NCATS · EMORY UNIVERSITY · PI HENRY M BLUMBERG, Anandi Nayan Sheth · 2017 to 2026
$14.1M
Translational Research Core - Engagement and Behavior ChangeP30DK111024 · NIDDK · EMORY UNIVERSITY · PI Mohammed Kumail Ali · 2016 to 2026
$13.4M
Neuro HPA Project 1U54AG062334 · NIA · EMORY UNIVERSITY · PI Cecile Delille Lahiri, Vasiliki Michopoulos · 2018 to 2026
$12.2M
Cancer Prevention Trng-Nutrition, Exercise &GeneticsR25CA094880 · NCI · UNIVERSITY OF WASHINGTON · PI WHITE, EMILY · 2002 to 2016
$7.3M
Validation and optimization of epigenetic clocksU01AG060908 · NIA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI RITZ, BEATE R. · 2018 to 2022
$3.4M
Epigenetic Mechanisms of PM-Mediated CVD RiskR01ES020836 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BACCARELLI, ANDREA, HOU, LIFANG · 2012 to 2016
$3.0M
Genetic Studies of Blood Cell Traits in Multi-Ethnic CohortsR01HL129132 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI LI, YUN, REINER, ALEXANDER P · 2016 to 2019
$2.7M
Biotechnology and Biological Sciences Research Council BB/S020845/1NCATS NIH HHS KL2 TR002381NCATS NIH HHS UL1 TR002378NCI NIH HHS R25 CA094880NHLBI NIH HHS HHSN268201100046CNHLBI NIH HHS HHSN268201600001CNHLBI NIH HHS HHSN268201600002CNHLBI NIH HHS HHSN268201600003CNHLBI NIH HHS HHSN268201600004CNHLBI NIH HHS HHSN268201600018CNHLBI NIH HHS R01 HL129132NIA NIH HHS U01 AG060908NIA NIH HHS U54 AG062334NIDDK NIH HHS P30 DK111024NIEHS NIH HHS P30 ES010126NIEHS NIH HHS R01 ES020836Wellcome Trust
6 · The paper itself

Abstract

backgroundDiet quality is a risk factor for chronic disease and mortality. Differential DNA methylation across the epigenome has been associated with chronic disease risk. Whether diet quality is associated with differential methylation is unknown. This study assessed whether diet quality was associated with differential DNA methylation measured across 445 548 loci in the Women's Health Initiative (WHI) and the TwinsUK cohort.

designThe discovery cohort consisted of 4355 women from the WHI. The replication cohort consisted of 571 mono- and dizygotic twins from the TwinsUK cohort. DNA methylation was measured in whole blood using the Illumina Infinium HumanMethylation450 Beadchip. Diet quality was assessed using the Alternative Healthy Eating Index 2010 (AHEI-2010). A meta-analysis, stratified by study cohort, was performed using generalized linear models that regressed methylation on AHEI-2010, adjusting for cell composition, chip number and location, study characteristics, principal components of genetic relatedness, age, smoking status, race/ethnicity and body mass index (BMI). Statistical significance was defined as a false discovery rate < 0.05. Significant sites were tested for replication in the TwinsUK cohort, with significant replication defined by P < 0.05 and a consistent direction.

resultsDiet quality was significantly associated with differential DNA methylation at 428 cytosine-phosphate-guanine (CpG) sites in the discovery cohort. A total of 24 CpG sites were consistent with replication in the TwinsUK cohort, more than would be expected by chance (P = 2.7x10-4), with one site replicated in both the blood and adipose tissue (cg16379999 located in the body of SEL1L).

conclusionsDiet quality was associated with methylation at 24 CpG sites, several of which have been associated with adiposity, inflammation and dysglycaemia. These findings may provide insight into pathways through which diet influences chronic disease.

Indexed as

Epigenesis, GeneticEpigenomeCpG IslandsDietDNA MethylationFemaleGenome-Wide Association StudyHumansProteinsWomen's HealthProteinsSEL1L protein, humandietary epigeneticsdiet qualityEpigenomeEWASWomen’s Health Initiative

Identifiers

PMID33354722
PMCPMC8128469
OpenAlexW3115522207

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.