Evidence map›Paper›PMID 33354518›Full record

ArticleMethodsX2021

Machine learning, waveform preprocessing and feature extraction methods for classification of acoustic startle waveforms.

Timothy J Fawcett, Chad S Cooper, Ryan J Longenecker, Joseph P Walton

Open access · goldAbstract read
In one paragraph

Article in MethodsX, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Timothy J FawcettGlobal Center for Hearing and Speech Research, University of South Florida, Tampa, FL, United States.
Chad S CooperGlobal Center for Hearing and Speech Research, University of South Florida, Tampa, FL, United States.
Ryan J LongeneckerGlobal Center for Hearing and Speech Research, University of South Florida, Tampa, FL, United States.
Joseph P WaltonGlobal Center for Hearing and Speech Research, University of South Florida, Tampa, FL, United States.
University of South Florida · US

Funding

Genetics Of StrokeZ01AG000954 · NIA · NATIONAL INSTITUTE ON AGING · PI SINGLETON, ANDREW · 2002 to 2008
$831k
Intramural NIH HHS Z01 AG000954
6 · The paper itself

Abstract

The acoustic startle response (ASR) is an involuntary muscle reflex that occurs in response to a transient loud sound and is a highly-utilized method of assessing hearing status in animal models. Currently, a high level of variability exists in the recording and interpretation of ASRs due to the lack of standardization for collecting and analyzing these measures. An ensembled machine learning model was trained to predict whether an ASR waveform is a startle or non-startle using highly-predictive features extracted from normalized ASR waveforms collected from young adult CBA/CaJ mice. Features were extracted from the normalized waveform as well as the power spectral density estimates and continuous wavelet transforms of the normalized waveform. Machine learning models utilizing methods from different families of algorithms were individually trained and then ensembled together, resulting in an extremely robust model.•ASR waveforms were normalized using the mean and standard deviation computed before the startle elicitor was presented•9 machine learning algorithms from 4 different families of algorithms were individually trained using features extracted from the normalized ASR waveforms•Trained machine learning models were ensembled to produce an extremely robust classifier.

Indexed as

Acoustic startle reflexEnsemble modelingMachine learningWaveform preprocessing

Identifiers

PMID33354518
PMCPMC7744771
OpenAlexW3108855172

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.