Evidence map›Paper›PMID 33353944›Full record

ArticleNature communications2020

TBPL2/TFIIA complex establishes the maternal transcriptome through oocyte-specific promoter usage.

Changwei Yu, Nevena Cvetesic, Vincent Hisler, Kapil Gupta, Tao Ye, Emese Gazdag, Luc Negroni, Petra Hajkova, Imre Berger, Boris Lenhard and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 54 citations in OpenAlex.

  1. Article
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  4. Clinicopathological predictors of central lymph node metastasis in clinically node-negative papillary thyroid carcinoma: a retrospective cohort analysis.European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery · 2026
    Article
  5. A recently evolved TAF8 isoform arising from anbioRxiv : the preprint server for biology · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Changwei YuInstitut de Génétique et de Biologie Moléculaire et Cellulaire, 67404, Illkirch, France.ORCID 0000-0002-0119-8616
Nevena CvetesicImperial College London, South Kensington Campus, London, SW7 2AZ, UK.ORCID 0000-0002-1575-5612
Vincent HislerInstitut de Génétique et de Biologie Moléculaire et Cellulaire, 67404, Illkirch, France.ORCID 0000-0002-3483-4906
Kapil GuptaMax Planck Bristol Centre for Minimal Biology, University of Bristol, Cantock's Close, Bristol, BS8 1TS, UK.ORCID 0000-0002-2115-3503
Tao YeInstitut de Génétique et de Biologie Moléculaire et Cellulaire, 67404, Illkirch, France.ORCID 0000-0002-3394-2083
Emese GazdagInstitut de Génétique et de Biologie Moléculaire et Cellulaire, 67404, Illkirch, France.ORCID 0000-0003-2178-2462
Luc NegroniInstitut de Génétique et de Biologie Moléculaire et Cellulaire, 67404, Illkirch, France.ORCID 0000-0002-6204-3917
Petra HajkovaImperial College London, South Kensington Campus, London, SW7 2AZ, UK.
Imre BergerMax Planck Bristol Centre for Minimal Biology, University of Bristol, Cantock's Close, Bristol, BS8 1TS, UK.ORCID 0000-0001-7518-9045
Boris LenhardImperial College London, South Kensington Campus, London, SW7 2AZ, UK.ORCID 0000-0002-1114-1509
Ferenc MüllerInstitute of Cancer and Genomic Sciences, College of Medical and Dental Sciences, University of Birmingham, Birmingham, B15 2TT, UK.ORCID 0000-0002-0996-774X
Stéphane D VincentInstitut de Génétique et de Biologie Moléculaire et Cellulaire, 67404, Illkirch, France. vincent@igbmc.fr.ORCID 0000-0003-1638-9615
László ToraInstitut de Génétique et de Biologie Moléculaire et Cellulaire, 67404, Illkirch, France. laszlo@igbmc.fr.ORCID 0000-0001-7398-2250
Centre National de la Recherche Scientifique · FRImperial College London · GBUniversity of Bristol · GBUniversity of Birmingham · GB

Funding

Medical Research Council MC_U120092689Medical Research Council MC_UP_1102/1Wellcome TrustWellcome Trust 106115/Z/14/ZWellcome Trust 106955/Z/15/Z
6 · The paper itself

Abstract

During oocyte growth, transcription is required to create RNA and protein reserves to achieve maternal competence. During this period, the general transcription factor TATA binding protein (TBP) is replaced by its paralogue, TBPL2 (TBP2 or TRF3), which is essential for RNA polymerase II transcription. We show that in oocytes TBPL2 does not assemble into a canonical TFIID complex. Our transcript analyses demonstrate that TBPL2 mediates transcription of oocyte-expressed genes, including mRNA survey genes, as well as specific endogenous retroviral elements. Transcription start site (TSS) mapping indicates that TBPL2 has a strong preference for TATA-like motif in core promoters driving sharp TSS selection, in contrast with canonical TBP/TFIID-driven TATA-less promoters that have broader TSS architecture. Thus, we show a role for the TBPL2/TFIIA complex in the establishment of the oocyte transcriptome by using a specific TSS recognition code.

Indexed as

Promoter Regions, GeneticAnimalsAnimals, NewbornFemaleGene Expression RegulationMiceMice, Inbred C57BLMutationNIH 3T3 CellsNuclear ProteinsOocytesRNA, MessengerTATA BoxTerminal Repeat SequencesTranscription Factor TFIIATranscription Factor TFIIDNuclear ProteinsRNA, MessengerTranscription Factor TFIIATranscription Factor TFIID

Identifiers

PMID33353944
PMCPMC7755920
OpenAlexW3117538202

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.