Evidence map›Paper›PMID 33349846›Full record

ArticleInternational journal of epidemiology2021

Per-partnership transmission probabilities for Chlamydia trachomatis infection: evidence synthesis of population-based survey data.

Joanna Lewis, Peter J White, Malcolm J Price

Abstract read
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Article in International journal of epidemiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

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6citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

3 authors.

Joanna LewisMRC Centre for Global Infectious Disease Analysis and National Institute for Health Research (NIHR) Health Protection Research Unit in Modelling and Health Economics, Imperial College London School of Public Health, London, UK.
Peter J WhiteMRC Centre for Global Infectious Disease Analysis and National Institute for Health Research (NIHR) Health Protection Research Unit in Modelling and Health Economics, Imperial College London School of Public Health, London, UK.
Malcolm J PriceInstitute of Applied Health Research, University of Birmingham, Birmingham, UK.

Funding

Medical Research Council MR/R015600/1
6 · The paper itself

Abstract

backgroundChlamydia is the most commonly diagnosed sexually transmitted infection worldwide. Mathematical models used to plan and assess control measures rely on accurate estimates of chlamydia's natural history, including the probability of transmission within a partnership. Several methods for estimating transmission probability have been proposed, but all have limitations.

methodsWe have developed a new model for estimating per-partnership chlamydia transmission probabilities from infected to uninfected individuals, using data from population-based surveys. We used data on sexual behaviour and prevalent chlamydia infection from the second UK National Study of Sexual Attitudes and Lifestyles (Natsal-2) and the US National Health and Nutrition Examination Surveys 2009-2014 (NHANES) for Bayesian inference of average transmission probabilities, across all new heterosexual partnerships reported. Posterior distributions were estimated by Markov chain Monte Carlo sampling using the Stan software.

resultsPosterior median male-to-female transmission probabilities per partnership were 32.1% [95% credible interval (CrI) 18.4-55.9%] (Natsal-2) and 34.9% (95%CrI 22.6-54.9%) (NHANES). Female-to-male transmission probabilities were 21.4% (95%CrI 5.1-67.0%) (Natsal-2) and 4.6% (95%CrI 1.0-13.1%) (NHANES). Posterior predictive checks indicated a well-specified model, although there was some discrepancy between reported and predicted numbers of partners, especially in women.

conclusionsThe model provides statistically rigorous estimates of per-partnership transmission probability, with associated uncertainty, which is crucial for modelling and understanding chlamydia epidemiology and control. Our estimates incorporate data from several sources, including population-based surveys, and use information contained in the correlation between number of partners and the probability of chlamydia infection. The evidence synthesis approach means that it is easy to include further data as it becomes available.

Indexed as

Chlamydia InfectionsSexually Transmitted DiseasesBayes TheoremChlamydia trachomatisFemaleHumansMaleNutrition SurveysPrevalenceSexual BehaviorBayesian statisticsChlamydiaevidence synthesismathematical modelpopulation-based surveytransmission

Identifiers

PMID33349846
PMCPMC8128448

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.