Evidence map›Paper›PMID 33349821›Full record

ArticleOrganic & biomolecular chemistry2021

Two-photon uncaging of bioactive thiols in live cells at wavelengths above 800 nm.

Matthew D Hammers, Michael H Hodny, Taysir K Bader, M Mohsen Mahmoodi, Sifei Fang, Alexander D Fenton, Kadiro Nurie, Hallie O Trial, Feng Xu, Andrew T Healy and 3 more

Open access · greenAbstract read
In one paragraph

Article in Organic & biomolecular chemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 9 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Matthew D HammersDepartment of Chemistry, University of Minnesota, Minneapolis, MN 55455, USA. diste001@umn.edu.
Michael H HodnyDepartment of Chemistry, University of Minnesota, Minneapolis, MN 55455, USA. diste001@umn.edu.
Taysir K BaderDepartment of Chemistry, University of Minnesota, Minneapolis, MN 55455, USA. diste001@umn.edu.
M Mohsen MahmoodiDepartment of Chemistry, University of Minnesota, Minneapolis, MN 55455, USA. diste001@umn.edu.
Sifei FangDepartment of Chemistry, University of Minnesota, Minneapolis, MN 55455, USA. diste001@umn.edu.
Alexander D FentonDepartment of Chemistry, University of Minnesota, Minneapolis, MN 55455, USA. diste001@umn.edu.ORCID 0000-0001-7892-3591
Kadiro NurieDepartment of Chemistry, University of Minnesota, Minneapolis, MN 55455, USA. diste001@umn.edu.
Hallie O TrialDepartment of Chemistry, Rice University, Houston, TX 77005, USA.
Feng XuDepartment of Chemistry, University of Minnesota, Minneapolis, MN 55455, USA. diste001@umn.edu.
Andrew T HealyDepartment of Chemistry, University of Minnesota, Minneapolis, MN 55455, USA. diste001@umn.edu.
Zachary T BallDepartment of Chemistry, Rice University, Houston, TX 77005, USA.ORCID 0000-0002-8681-0789
David A BlankDepartment of Chemistry, University of Minnesota, Minneapolis, MN 55455, USA. diste001@umn.edu.
Mark D DistefanoDepartment of Chemistry, University of Minnesota, Minneapolis, MN 55455, USA. diste001@umn.edu.ORCID 0000-0002-2872-0259
University of Minnesota · USRice University · US

Funding

Enzymatic Protein LabelingR01GM084152 · NIGMS · UNIVERSITY OF MINNESOTA · PI DISTEFANO, MARK D · 2010 to 2019
$2.6M
LIGHT ACTIVATED ANTI-CANCER DRUGSR21CA185783 · NCI · UNIVERSITY OF MINNESOTA · PI DISTEFANO, MARK D · 2014 to 2015
$338k
Wavelength-Selective Caged Cysteine for Studying Ras Protein-Protein and Membrane Localization DynamicsF32GM126862 · NIGMS · UNIVERSITY OF MINNESOTA · PI HAMMERS, MATTHEW · 2017 to 2018
$111k
NCI NIH HHS R21 CA185783NIGMS NIH HHS F32 GM126862NIGMS NIH HHS R01 GM084152
6 · The paper itself

Abstract

Photoactivatable protecting groups (PPGs) are useful for a broad range of applications ranging from biology to materials science. In chemical biology, induction of biological processes via photoactivation is a powerful strategy for achieving spatiotemporal control. The importance of cysteine, glutathione, and other bioactive thiols in regulating protein structure/activity and cell redox homeostasis makes modulation of thiol activity particularly useful. One major objective for enhancing the utility of photoactivatable protecting groups (PPGs) in living systems is creating PPGs with longer wavelength absorption maxima and efficient two-photon (TP) absorption. Toward these objectives, we developed a carboxyl- and dimethylamine-functionalized nitrodibenzofuran PPG scaffold (cDMA-NDBF) for thiol photoactivation, which has a bathochromic shift in the one-photon absorption maximum from λmax = 315 nm with the unfunctionalized NDBF scaffold to λmax = 445 nm. While cDMA-NDBF-protected thiols are stable in the presence of UV irradiation, they undergo efficient broad-spectrum TP photolysis at wavelengths as long as 900 nm. To demonstrate the wavelength orthogonality of cDMA-NDBF and NDBF photolysis in a biological setting, caged farnesyltransferase enzyme inhibitors (FTI) were prepared and selectively photoactivated in live cells using 850-900 nm TP light for cDMA-NDBF-FTI and 300 nm UV light for NDBF-FTI. These experiments represent the first demonstration of thiol photoactivation at wavelengths above 800 nm. Consequently, cDMA-NDBF-caged thiols should have broad applicability in a wide range of experiments in chemical biology and materials science.

Indexed as

AnimalsBenzofuransDogsEnzyme InhibitorsFarnesyltranstransferaseInfrared RaysMadin Darby Canine Kidney CellsPhotolysisPhotonsSulfhydryl CompoundsBenzofuransEnzyme InhibitorsFarnesyltranstransferaseSulfhydryl Compounds

Identifiers

PMID33349821
PMCPMC8437107
OpenAlexW3108571184

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.