Evidence map›Paper›PMID 33349712›Full record

ArticleNature neuroscience2021

Transcriptomic organization of the human brain in post-traumatic stress disorder.

Matthew J Girgenti, Jiawei Wang, Dingjue Ji, Dianne A Cruz, Traumatic Stress Brain Research Group, Murray B Stein, Joel Gelernter, Keith A Young, Bertrand R Huber, Douglas E Williamson and 4 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature neuroscience, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 117 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
117citing papers in PubMed, 3 pooled it
10.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

117 citing papers in PubMed, 3 syntheses or guidelines pooled it, 176 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. ICER-Controlled inhibitory plasticity of amygdala engram neurons regulates fear memory precision.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2026
    Article
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  7. Cellular transcriptomic signatures underpinning the heterogeneity of depression in Alzheimer's disease.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2026
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57 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 8 institutions in 1 country.

Matthew J GirgentiDepartment of Psychiatry, Yale University School of Medicine, New Haven, CT, USA. matthew.girgenti@yale.edu.ORCID http://orcid.org/0000-0003-1647-326X
Jiawei WangDepartment of Biostatistics, Yale School of Public Health, New Haven, CT, USA.ORCID http://orcid.org/0000-0003-2627-4897
Dingjue JiDepartment of Biostatistics, Yale School of Public Health, New Haven, CT, USA.ORCID http://orcid.org/0000-0001-6288-8891
Dianne A CruzDepartment of Psychiatry and Behavioral Sciences, Duke University Medical Center, Durham, NC, USA.
Traumatic Stress Brain Research Group
Murray B SteinVA San Diego Healthcare System, San Diego, CA, USA.ORCID http://orcid.org/0000-0001-9564-2871
Joel GelernterDepartment of Psychiatry, Yale University School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0002-4067-1859
Keith A YoungBaylor Scott and White Psychiatry, Temple, TX, USA.
Bertrand R HuberNational Center for PTSD, US Department of Veterans Affairs, White River Junction, VT, USA.
Douglas E WilliamsonDepartment of Psychiatry and Behavioral Sciences, Duke University Medical Center, Durham, NC, USA.
Matthew J FriedmanNational Center for PTSD, US Department of Veterans Affairs, White River Junction, VT, USA. matthew.j.friedman@dartmouth.edu.ORCID http://orcid.org/0000-0002-0497-6890
John H KrystalDepartment of Psychiatry, Yale University School of Medicine, New Haven, CT, USA. john.krystal@yale.edu.ORCID http://orcid.org/0000-0001-6952-1726
Hongyu ZhaoDepartment of Biostatistics, Yale School of Public Health, New Haven, CT, USA. hongyu.zhao@yale.edu.ORCID http://orcid.org/0000-0003-1195-9607
Ronald S DumanDepartment of Psychiatry, Yale University School of Medicine, New Haven, CT, USA.ORCID http://orcid.org/0000-0001-8690-8439
Yale University · USUnited States Department of Veterans Affairs · USBaylor Scott & White Medical Center - Temple · USBoston University · USDartmouth College · USDuke Medical Center · USDurham VA Health Care System · USUniversity of California San Diego · US

Funding

Role of mTOR and Synaptogenesis in the Actions of Rapid-Acting AntidepressantsR01MH093897 · NIMH · YALE UNIVERSITY · PI DILEONE, RALPH J · 2011 to 2021
$5.0M
Synaptic mechanisms underlying the rapid antidepressant actions of scopolamineR01MH105910 · NIMH · YALE UNIVERSITY · PI PICCIOTTO, MARINA R · 2014 to 2018
$2.2M
NIMH NIH HHS R01 MH093897
6 · The paper itself

Abstract

Despite extensive study of the neurobiological correlates of post-traumatic stress disorder (PTSD), little is known about its molecular determinants. Here, differential gene expression and network analyses of four prefrontal cortex subregions from postmortem tissue of people with PTSD demonstrate extensive remodeling of the transcriptomic landscape. A highly connected downregulated set of interneuron transcripts is present in the most significant gene network associated with PTSD. Integration of this dataset with genotype data from the largest PTSD genome-wide association study identified the interneuron synaptic gene ELFN1 as conferring significant genetic liability for PTSD. We also identified marked transcriptomic sexual dimorphism that could contribute to higher rates of PTSD in women. Comparison with a matched major depressive disorder cohort revealed significant divergence between the molecular profiles of individuals with PTSD and major depressive disorder despite their high comorbidity. Our analysis provides convergent systems-level evidence of genomic networks within the prefrontal cortex that contribute to the pathophysiology of PTSD in humans.

Indexed as

TranscriptomeAdultAutopsyBrain ChemistryCohort StudiesFemaleGene Expression RegulationGene Regulatory NetworksGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansInterneuronsMajor Depressive DisorderMaleMiddle AgedNerve Tissue ProteinsELFN1 protein, humanNerve Tissue Proteins

Identifiers

PMID33349712
OpenAlexW3114344314

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.