Evidence map›Paper›PMID 33349335›Full record

ArticleeLife2020

A structure of substrate-bound Synaptojanin1 provides new insights in its mechanism and the effect of disease mutations.

Jone Paesmans, Ella Martin, Babette Deckers, Marjolijn Berghmans, Ritika Sethi, Yannick Loeys, Els Pardon, Jan Steyaert, Patrik Verstreken, Christian Galicia and 1 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 19 citations in OpenAlex.

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  8. Interaction between S4 and the phosphatase domain mediates electrochemical coupling in voltage-sensing phosphatase (VSP).Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Jone Paesmans *VIB-VUB Center for Structural Biology, Brussels, Belgium.ORCID 0000-0002-3292-4609
Ella Martin *VIB-VUB Center for Structural Biology, Brussels, Belgium.ORCID 0000-0002-9607-7074
Babette DeckersVIB-VUB Center for Structural Biology, Brussels, Belgium.ORCID 0000-0002-3855-4776
Marjolijn BerghmansVIB-VUB Center for Structural Biology, Brussels, Belgium.ORCID 0000-0002-8699-6915
Ritika SethiVIB-VUB Center for Structural Biology, Brussels, Belgium.
Yannick LoeysVIB-VUB Center for Structural Biology, Brussels, Belgium.
Els PardonVIB-VUB Center for Structural Biology, Brussels, Belgium.ORCID 0000-0002-2466-0172
Jan SteyaertVIB-VUB Center for Structural Biology, Brussels, Belgium.ORCID 0000-0002-3825-874X
Patrik VerstrekenVIB-KU Leuven Center for Brain and Disease Research, Leuven, Belgium.
Christian GaliciaVIB-VUB Center for Structural Biology, Brussels, Belgium.ORCID 0000-0001-6080-7533
Wim VerséesVIB-VUB Center for Structural Biology, Brussels, Belgium.ORCID 0000-0002-4695-696X
Vrije Universiteit Brussel · BEVIB-KU Leuven Center for Brain & Disease Research · BE

Funding

Fonds Wetenschappelijk Onderzoek 11D4621NFonds Wetenschappelijk Onderzoek 1S04918NFonds Wetenschappelijk Onderzoek 1S09120NFonds Wetenschappelijk Onderzoek G0D3317NVrije Universiteit Brussel SRP50Vrije Universiteit Brussel Strategic Research Program Financing - SRP50
6 · The paper itself

Abstract

Synaptojanin1 (Synj1) is a phosphoinositide phosphatase, important in clathrin uncoating during endocytosis of presynaptic vesicles. It was identified as a potential drug target for Alzheimer's disease, Down syndrome, and TBC1D24-associated epilepsy, while also loss-of-function mutations in Synj1 are associated with epilepsy and Parkinson's disease. Despite its involvement in a range of disorders, structural, and detailed mechanistic information regarding the enzyme is lacking. Here, we report the crystal structure of the 5-phosphatase domain of Synj1. Moreover, we also present a structure of this domain bound to the substrate diC8-PI(3,4,5)P

Indexed as

HumansMutation, MissensePhosphoinositide 5-PhosphatasesPhosphoric Monoester HydrolasesProtein ConformationProtein DomainsPhosphoinositide 5-PhosphatasesPhosphoric Monoester Hydrolasesbiochemistrycatalytic mechanismchemical biologyenzyme-substrate complexepilepsyinositol polyphosphate 5-phosphatasemolecular biophysicsnoneParkinson's diseasephosphoinositidestructural biology

Identifiers

PMID33349335
PMCPMC7781601
OpenAlexW3116561787

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.