Evidence map›Paper›PMID 33348536›Full record

ArticleMarine drugs2020

Sustainable Low-Volume Analysis of Environmental Samples by Semi-Automated Prioritization of Extracts for Natural Product Research (SeaPEPR).

Riyanti, Michael Marner, Christoph Hartwig, Maria A Patras, Stevy I M Wodi, Frets J Rieuwpassa, Frans G Ijong, Walter Balansa, Till F Schäberle

Abstract read
In one paragraph

Article in Marine drugs, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Extracts ofMicroorganisms · 2023
    Article
  7. Crude Extracts ofViruses · 2023
    Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

RiyantiInstitute for Insect Biotechnology, Justus-Liebig-University of Giessen, 35392 Giessen, Germany.ORCID 0000-0003-0665-8092
Michael MarnerFraunhofer Institute for Molecular Biology and Applied Ecology (IME), Branch for Bioresources, 35392 Giessen, Germany.ORCID 0000-0002-1024-1567
Christoph HartwigFraunhofer Institute for Molecular Biology and Applied Ecology (IME), Branch for Bioresources, 35392 Giessen, Germany.ORCID 0000-0003-2050-9579
Maria A PatrasFraunhofer Institute for Molecular Biology and Applied Ecology (IME), Branch for Bioresources, 35392 Giessen, Germany.
Stevy I M WodiDepartment of Fisheries and Marine Science, Politeknik Negeri Nusa Utara, Tahuna Sangihe Islands, North Sulawesi 95812, Indonesia.ORCID 0000-0001-5009-7611
Frets J RieuwpassaDepartment of Fisheries and Marine Science, Politeknik Negeri Nusa Utara, Tahuna Sangihe Islands, North Sulawesi 95812, Indonesia.ORCID 0000-0002-1662-2918
Frans G IjongDepartment of Fisheries and Marine Science, Politeknik Negeri Nusa Utara, Tahuna Sangihe Islands, North Sulawesi 95812, Indonesia.
Walter BalansaDepartment of Fisheries and Marine Science, Politeknik Negeri Nusa Utara, Tahuna Sangihe Islands, North Sulawesi 95812, Indonesia.
Till F SchäberleInstitute for Insect Biotechnology, Justus-Liebig-University of Giessen, 35392 Giessen, Germany.ORCID 0000-0001-9947-8079

Funding

BMBF 16GW0117KIndonesia Endowment Fund for Education (LPDP) 20160222305487Indonesian Ministry of Research Technology and Higher Education No.01/PL30/P3M/P-DSR/2019
6 · The paper itself

Abstract

The discovery of novel natural products (NPs) that will serve as lead structures has to be an ongoing effort to fill the respective development pipelines. However, identification of NPs, which possess a potential for application in e.g., the pharma or agro sector, must be as cost effective and fast as possible. Furthermore, the amount of sample available for initial testing is usually very limited, not least because of the fact that the impact on the environment, i.e., the sampled biosystem, should be kept minimal. Here, our pipeline SeaPEPR is described, in which a primary bioactivity screening of crude extracts is combined with the analysis of their metabolic fingerprint. This enabled prioritization of samples for subsequent microfractionation and dereplication of the active compounds early in the workflow. As a case study, 76 marine sponge-derived extracts were screened against a microbial screening panel. Thereunder, human pathogenic bacteria (

Indexed as

AnimalsAutomationBacteriaBiological ProductsEnvironmental MonitoringFungiGreen Chemistry TechnologyMetabolic Networks and PathwaysMicrobial Sensitivity TestsPlant ExtractsPoriferaBiological ProductsPlant Extractsantibioticsdereplicationmarine spongesnatural productsplant pathogen

Identifiers

PMID33348536
PMCPMC7765863

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.