Evidence map›Paper›PMID 33344448›Full record

ArticleFrontiers in cell and developmental biology2020

Transcriptome Response and Spatial Pattern of Gene Expression in the Primate Subventricular Zone Neurogenic Niche After Cerebral Ischemia.

Monika C Chongtham, Haifang Wang, Christina Thaller, Nai-Hua Hsiao, Ivan H Vachkov, Stoyan P Pavlov, Lorenz H Williamson, Tetsumori Yamashima, Anastassia Stoykova, Jun Yan and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cell and developmental biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. International journal of molecular sciences · 2025
    Article
  3. Article
  4. Review
  5. Transcriptomic Profiling of Reproductive Age Marmoset Monkey Ovaries.Reproductive sciences (Thousand Oaks, Calif.) · 2024
    Article
  6. Review
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 4 countries.

Monika C ChongthamDepartment of Genes and Behavior, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany.
Haifang WangInstitute of Neuroscience, State Key Laboratory of Neuroscience, CAS Center for Excellence in Brain Science and Intelligence Technology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China.
Christina ThallerDepartment of Genes and Behavior, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany.
Nai-Hua HsiaoDepartment of Genes and Behavior, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany.
Ivan H VachkovDepartment of Genes and Behavior, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany.
Stoyan P PavlovDepartment of Anatomy and Cell Biology, Faculty of Medicine, Medical University, Varna, Bulgaria.
Lorenz H WilliamsonDepartment of Anatomy and Cell Biology, Faculty of Medicine, Medical University, Varna, Bulgaria.
Tetsumori YamashimaDepartment of Psychiatry and Behavioral Science, Kanazawa University Graduate School of Medical Sciences, Kanazawa, Japan.
Anastassia StoykovaDepartment of Genes and Behavior, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany.
Jun YanInstitute of Neuroscience, State Key Laboratory of Neuroscience, CAS Center for Excellence in Brain Science and Intelligence Technology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China.
Gregor EicheleDepartment of Genes and Behavior, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany.
Anton B TonchevDepartment of Genes and Behavior, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany.
Max Planck Institute for Biophysical Chemistry · DEMedical University of Varna · BGChinese Academy of Sciences · CNKanazawa University · JPShanghai Institutes for Biological Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The main stem cell niche for neurogenesis in the adult mammalian brain is the subventricular zone (SVZ) that extends along the cerebral lateral ventricles. We aimed at characterizing the initial molecular responses of the macaque monkey SVZ to transient, global cerebral ischemia. We microdissected tissue lining the anterior horn of the lateral ventricle (SVZa) from 7 day post-ischemic and sham-operated monkeys. Transcriptomics shows that in ischemic SVZa, 541 genes were upregulated and 488 genes were down-regulated. The transcription data encompassing the upregulated genes revealed a profile typical for quiescent stem cells and astrocytes. In the primate brain the SVZ is morphologically subdivided in distinct and separate ependymal and subependymal regions. The subependymal contains predominantly neural stem cells (NSC) and differentiated progenitors. To determine in which SVZa region ischemia had evoked transcriptional upregulation, sections through control and ischemic SVZa were analyzed by high-throughput

Indexed as

cell markerglobal ischemianeural stem cellnon-human primatesubventricular zone

Identifiers

PMID33344448
PMCPMC7744782
OpenAlexW3108009475

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.