ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2020
Genomic and Phenotypic Divergence in Wild Barley Driven by Microgeographic Adaptation.
Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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9 citing papers in PubMed.
- Speciation, endangerment and adaptation in limestone rocky environment ofPlant diversity · 2026Article
- Genomic Insights into Hybridization and Speciation of Mitten Crabs in the Eriocheir Genus.Genomics, proteomics & bioinformatics · 2025Article
- Species divergence and environmental adaptation ofEcology and evolution · 2024Article
- Triticeae crop genome biology: an endless frontier.Frontiers in plant science · 2023Review
- Genome diversity and highland-adaptative variation in Tibet barley landrace population of China.Frontiers in plant science · 2023Article
- Incipient Sympatric Speciation and Evolution of Soil Bacteria Revealed by Metagenomic and Structured Non-Coding RNAs Analysis.Biology · 2022Article
- Whole-genome sequencing reveals the artificial selection and local environmental adaptability of pigeons (Evolutionary applications · 2022Article
- Multi-Omics Analysis Reveals the Mechanism Underlying the Edaphic Adaptation in Wild Barley at Evolution Slope (Tabigha).Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2021Article
- Genomic and Phenotypic Divergence in Wild Barley Driven by Microgeographic Adaptation.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2020Article
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14 authors.
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Abstract
Microgeographic adaptation is a fundamental driving force of evolution, but the underlying causes remain undetermined. Here, the phenotypic, genomic and transcriptomic variations of two wild barley populations collected from sharply divergent and adjacent micro-geographic sites to identify candidate genes associated with edaphic local adaptation are investigated. Common garden and reciprocal transplant studies show that large phenotypic differentiation and local adaptation to soils occur between these populations. Genetic, phylogenetic and admixture analyses based on population resequencing show that significant genetic divergences occur between basalt and chalk populations. These divergences are consistent with the phenotypic variations observed in the field. Genome sweep analyses reveal 162.7 Mb of selected regions driven by edaphic local adaptation, in which 445 genes identified, including genes associated with root architecture, metal transport/detoxification, and ABA signaling. When the phenotypic, genomic and transcriptomic data are combined, HvMOR, encoding an LBD transcription factor, is determined to be the vital candidate for regulating the root architecture to adapt to edaphic conditions at the microgeographic scale. This study provides new insights into the genetic basis of edaphic adaptation and demonstrates that edaphic factors may contribute to the evolution and speciation of barley.
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